Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0094 |
Symbol | |
ID | 8324240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | - |
Start bp | 102023 |
End bp | 103051 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644940633 |
Product | TIR protein |
Protein accession | YP_003097914 |
Protein GI | 256374254 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.127625 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCGGAAGA CCAGGAGAAC CGGCGGGCTA ACCTGCGGTG TGCCGCCCTC GGAGGAGTCC CCCATCCGCG TCTTCCTGAG CTACGCGCAG GACGACGACC ACGTGCTCGG CTTCATCGGG CCGTTCACCC GCGCGCTGGA GCAGTTCGCC TTCTCCGACC GGGGCAGGCG CGTCGAGGTG TTCGTCGACC GCACCGACCT GGTGTGGGGC CAGGAGTGGC GCAGCGGCAT CGACCAGGCG ATCGACAGCG CGCCGGTGTT CCTGCCGCTG ATCACCAACC TGTACTTCGA CCGCCCGTAC TGCCGCAAGG AGCTGCACCG CTTCCACAGC GAGGCCGACC GGCGGGGCGT GCCGTCGCTG CTGCTGCCGG TCGTGCTGCT CGGGCACCGG ATGCTCACCC CCGACCACGA GGACCCGCTG GTGCGGGTGA TCAGCGAGCG CCAGTACCGG GACCTGCGGG AGGCGATGCT GGAGGGCAGC GGGTCGGCGG TGTGGCGGCG GGCGGTGCTG GCGCTGGCGG GCGACCTGGT GGACGTGGTG GAGGAGGCCG AGCGGGTGCT GGCCACCGCT CCCCCGGCCC CGTCCGCCGA CGAGGACCCG CTGCTGGGCG CGTTCCGCGA GCGGCACCGG GCGGTGGGGG CGCTGCTGGC CGAGGTGCGC ACGGCGCTGT CGGCCGAGCT GGTGGCCGTC GAGCGGGCCT CGGTGCGCCC GTCGGTGGAG GCGCAGCGGA CGGCGCTGGG CGTGGCCTCC GCGCTGCGGG TGCTCGGTGA GCGGTTCAGC GACGGGTGCC GGGACTACGA GGCGGCGGTG GCCGGGGCGC TGGCCCCGGA GCGGCGCGCG GGCGCGGCGG CGCTGGCCGA CGAGGTGGCG GCGCTGTGGG CGGACGAGCG GGCGGTCTCG GACCTGCTCG ACCGCTTCCG CCCGCTGGAG GAGGAGTACG CGCCGCTGCG GCACACGCTG CGGACGCTGC GACGCGGGTG CAAGTCGCTG CAGACGGCGC TGCTGCTGGT GGAGCGGGGA GCGGGCTGA
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Protein sequence | MRKTRRTGGL TCGVPPSEES PIRVFLSYAQ DDDHVLGFIG PFTRALEQFA FSDRGRRVEV FVDRTDLVWG QEWRSGIDQA IDSAPVFLPL ITNLYFDRPY CRKELHRFHS EADRRGVPSL LLPVVLLGHR MLTPDHEDPL VRVISERQYR DLREAMLEGS GSAVWRRAVL ALAGDLVDVV EEAERVLATA PPAPSADEDP LLGAFRERHR AVGALLAEVR TALSAELVAV ERASVRPSVE AQRTALGVAS ALRVLGERFS DGCRDYEAAV AGALAPERRA GAAALADEVA ALWADERAVS DLLDRFRPLE EEYAPLRHTL RTLRRGCKSL QTALLLVERG AG
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