Gene Amir_0094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0094 
Symbol 
ID8324240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp102023 
End bp103051 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content75% 
IMG OID644940633 
ProductTIR protein 
Protein accessionYP_003097914 
Protein GI256374254 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.127625 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGCGGAAGA CCAGGAGAAC CGGCGGGCTA ACCTGCGGTG TGCCGCCCTC GGAGGAGTCC 
CCCATCCGCG TCTTCCTGAG CTACGCGCAG GACGACGACC ACGTGCTCGG CTTCATCGGG
CCGTTCACCC GCGCGCTGGA GCAGTTCGCC TTCTCCGACC GGGGCAGGCG CGTCGAGGTG
TTCGTCGACC GCACCGACCT GGTGTGGGGC CAGGAGTGGC GCAGCGGCAT CGACCAGGCG
ATCGACAGCG CGCCGGTGTT CCTGCCGCTG ATCACCAACC TGTACTTCGA CCGCCCGTAC
TGCCGCAAGG AGCTGCACCG CTTCCACAGC GAGGCCGACC GGCGGGGCGT GCCGTCGCTG
CTGCTGCCGG TCGTGCTGCT CGGGCACCGG ATGCTCACCC CCGACCACGA GGACCCGCTG
GTGCGGGTGA TCAGCGAGCG CCAGTACCGG GACCTGCGGG AGGCGATGCT GGAGGGCAGC
GGGTCGGCGG TGTGGCGGCG GGCGGTGCTG GCGCTGGCGG GCGACCTGGT GGACGTGGTG
GAGGAGGCCG AGCGGGTGCT GGCCACCGCT CCCCCGGCCC CGTCCGCCGA CGAGGACCCG
CTGCTGGGCG CGTTCCGCGA GCGGCACCGG GCGGTGGGGG CGCTGCTGGC CGAGGTGCGC
ACGGCGCTGT CGGCCGAGCT GGTGGCCGTC GAGCGGGCCT CGGTGCGCCC GTCGGTGGAG
GCGCAGCGGA CGGCGCTGGG CGTGGCCTCC GCGCTGCGGG TGCTCGGTGA GCGGTTCAGC
GACGGGTGCC GGGACTACGA GGCGGCGGTG GCCGGGGCGC TGGCCCCGGA GCGGCGCGCG
GGCGCGGCGG CGCTGGCCGA CGAGGTGGCG GCGCTGTGGG CGGACGAGCG GGCGGTCTCG
GACCTGCTCG ACCGCTTCCG CCCGCTGGAG GAGGAGTACG CGCCGCTGCG GCACACGCTG
CGGACGCTGC GACGCGGGTG CAAGTCGCTG CAGACGGCGC TGCTGCTGGT GGAGCGGGGA
GCGGGCTGA
 
Protein sequence
MRKTRRTGGL TCGVPPSEES PIRVFLSYAQ DDDHVLGFIG PFTRALEQFA FSDRGRRVEV 
FVDRTDLVWG QEWRSGIDQA IDSAPVFLPL ITNLYFDRPY CRKELHRFHS EADRRGVPSL
LLPVVLLGHR MLTPDHEDPL VRVISERQYR DLREAMLEGS GSAVWRRAVL ALAGDLVDVV
EEAERVLATA PPAPSADEDP LLGAFRERHR AVGALLAEVR TALSAELVAV ERASVRPSVE
AQRTALGVAS ALRVLGERFS DGCRDYEAAV AGALAPERRA GAAALADEVA ALWADERAVS
DLLDRFRPLE EEYAPLRHTL RTLRRGCKSL QTALLLVERG AG