Gene Amir_0091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0091 
Symbol 
ID8324237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand+ 
Start bp98519 
End bp99178 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content78% 
IMG OID644940630 
Producttranscriptional regulator, IclR family 
Protein accessionYP_003097911 
Protein GI256374251 
COG category[K] Transcription 
COG ID[COG1414] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.804126 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGCCGGT CACCGGAGGC CGGGCGCGCC GACCAGAAGG AGAGCTCGCT GACCCTGGAG 
CGGGGCCTCG CGCTGCTCCA GGCCGTCGCC GACGCCGAGT CCGACGCGCC CACCATCAGC 
GAGCTGGCCA CCGCCATCGG CGCGTCCCGC GCGGCCGTCT ACCGGCTGCT CGTGCCGCTC 
CAGGCGCGCG GCCTGGTCCG CCGCGAGGGC TCCAAGGTCC GGCTGGGCCT TGGCGTGCTG 
CGGCTGGCCG CCAACGTGCT GCCGCAGCTG CGCATCGCCG CGCAGCCCGC GCTGCGCGAG 
CTCGCCGAGG CGGTGGGCGC CACCGCGCAC CTGACGGTCG CGGACGGGGC GGAGGCGCAG 
GCGGTGGCCG TGGTGGAGCC GTCGTGGACG GCTTTTCACG TCGCCTACCG CGTGGGCAGT 
CGGCACCCGG CGCACCGCGG GGCCGCCGGC CGGGCGATCG GCCTCTCGAC CGAGGGGGCG 
CAGTGGACCG TCTCCTCGGG CGAGCTGCAA CACGGCGCGT TCGGCGTGGC GGCCCCCGTC 
AGGGGGGTGC ACGGGCTGCG GGCCAGCGTC GGCGTCGTGT CCCTCGACGA ACTGGTCGGC 
GACCGGGTCG GCCCCCAGGT CGTGGCGGCG GCGCAGCAGG TCGCGGACGC GCTGCGCTGA
 
Protein sequence
MSRSPEAGRA DQKESSLTLE RGLALLQAVA DAESDAPTIS ELATAIGASR AAVYRLLVPL 
QARGLVRREG SKVRLGLGVL RLAANVLPQL RIAAQPALRE LAEAVGATAH LTVADGAEAQ 
AVAVVEPSWT AFHVAYRVGS RHPAHRGAAG RAIGLSTEGA QWTVSSGELQ HGAFGVAAPV 
RGVHGLRASV GVVSLDELVG DRVGPQVVAA AQQVADALR