Gene Amir_0078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0078 
Symbol 
ID8324224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp86596 
End bp87294 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content75% 
IMG OID644940617 
Productglycerophosphoryl diester phosphodiesterase 
Protein accessionYP_003097898 
Protein GI256374238 
COG category[C] Energy production and conversion 
COG ID[COG0584] Glycerophosphoryl diester phosphodiesterase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGTCCCCCG AAGTGGTCGC CCACCGAGGC GCCTCCGCGG CCCTGCCCGA GCACACCCTC 
GCCGCCTACG AGCTGGCGAT CGCCGAGGGC GCCGACGCCC TGGAGTGCGA CGTCCGCCTG
ACCAGGGACG AGCAGCTGGT CTGCGTCCAC GACCGCACCG TCTCCCGCAC CAGCGACGGA
CGGGGCGCGG TCGGCGCGCT CACCCTCGCC GAGCTGCGCG CGCTCGACTT CGGCTCCTGG
CACGGCGGCG ACCCGGCCCC CGTGCTGACC TTCGCGGAGC TGGCGGGCCT GGCCGCCGAC
CACGGGACCC CGCTGTTCGT CGAGACCAAG CACCCGGTGC GCACCGGCGG GCTGGTGGAG
ACCAGGCTCG CGCAGGAGCT GGCCCGGCAC TCGCTGGACG TGCACATGAT GTCGTTCTCC
GCGCTCGCGG TGCGCCGCTT CAAAGCGCTC GCGCCCGCCG TTCCCACGGT CTGGCTGCTC
GACCGGCTGT GGCCCCAGCG GCTACCCGAA TGGGCGGATC TGCCGGGGCC CGGCGTGTCC
CTGCTGCGCC GCTCGCCGGG ACGCGGCCGG GGTGCTTACT GCTGGACCGT GGACACGGCG
CCCGACATCG ACCTGTGCCG CGAGCGGGGC GTGCGCCACC TGGCGACCAA CCACCCGGCG
CGAACCCGCA AGATCCTTGC GGCAGACTTG GCCCCCTGA
 
Protein sequence
MSPEVVAHRG ASAALPEHTL AAYELAIAEG ADALECDVRL TRDEQLVCVH DRTVSRTSDG 
RGAVGALTLA ELRALDFGSW HGGDPAPVLT FAELAGLAAD HGTPLFVETK HPVRTGGLVE
TRLAQELARH SLDVHMMSFS ALAVRRFKAL APAVPTVWLL DRLWPQRLPE WADLPGPGVS
LLRRSPGRGR GAYCWTVDTA PDIDLCRERG VRHLATNHPA RTRKILAADL AP