Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0078 |
Symbol | |
ID | 8324224 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 86596 |
End bp | 87294 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 644940617 |
Product | glycerophosphoryl diester phosphodiesterase |
Protein accession | YP_003097898 |
Protein GI | 256374238 |
COG category | [C] Energy production and conversion |
COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTCCCCCG AAGTGGTCGC CCACCGAGGC GCCTCCGCGG CCCTGCCCGA GCACACCCTC GCCGCCTACG AGCTGGCGAT CGCCGAGGGC GCCGACGCCC TGGAGTGCGA CGTCCGCCTG ACCAGGGACG AGCAGCTGGT CTGCGTCCAC GACCGCACCG TCTCCCGCAC CAGCGACGGA CGGGGCGCGG TCGGCGCGCT CACCCTCGCC GAGCTGCGCG CGCTCGACTT CGGCTCCTGG CACGGCGGCG ACCCGGCCCC CGTGCTGACC TTCGCGGAGC TGGCGGGCCT GGCCGCCGAC CACGGGACCC CGCTGTTCGT CGAGACCAAG CACCCGGTGC GCACCGGCGG GCTGGTGGAG ACCAGGCTCG CGCAGGAGCT GGCCCGGCAC TCGCTGGACG TGCACATGAT GTCGTTCTCC GCGCTCGCGG TGCGCCGCTT CAAAGCGCTC GCGCCCGCCG TTCCCACGGT CTGGCTGCTC GACCGGCTGT GGCCCCAGCG GCTACCCGAA TGGGCGGATC TGCCGGGGCC CGGCGTGTCC CTGCTGCGCC GCTCGCCGGG ACGCGGCCGG GGTGCTTACT GCTGGACCGT GGACACGGCG CCCGACATCG ACCTGTGCCG CGAGCGGGGC GTGCGCCACC TGGCGACCAA CCACCCGGCG CGAACCCGCA AGATCCTTGC GGCAGACTTG GCCCCCTGA
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Protein sequence | MSPEVVAHRG ASAALPEHTL AAYELAIAEG ADALECDVRL TRDEQLVCVH DRTVSRTSDG RGAVGALTLA ELRALDFGSW HGGDPAPVLT FAELAGLAAD HGTPLFVETK HPVRTGGLVE TRLAQELARH SLDVHMMSFS ALAVRRFKAL APAVPTVWLL DRLWPQRLPE WADLPGPGVS LLRRSPGRGR GAYCWTVDTA PDIDLCRERG VRHLATNHPA RTRKILAADL AP
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