| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Amir_0047 |
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| Symbol | |
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| ID | 8324192 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Actinosynnema mirum DSM 43827 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013093 |
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| Strand | - |
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| Start bp | 51262 |
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| End bp | 52014 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 75% |
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| IMG OID | 644940585 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003097867 |
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| Protein GI | 256374207 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGATCT CGGGCACCGC GGCGATCGTC ACCGGCGGAG CGTCGGGGCT GGGCGCCGCC
ACCGCGCGCG CGCTCGCCGC GCGGGGGGCG CGCGTGTTCG CGCTGGACAT CTCGGTGGAC
GGCGCCCCCG CCGTGGAGGG CGTCACCTAC CTGGCGGCGG ACGTCACCTC GGAGGAGGAC
GTCCAAGCGG CCGTCGACAC CGCCGCGGGC TCCGGCGCTC CGCTGCGGAT CGCGGTGAAC
TGCGCGGGCA TCGGCCCGTC GACCAGGACG GTCGGCAAGG CCGGTCCGCA CCCGCTCGAC
CTGTACCGCA AGGTCCTGGA CGTGAACGTG GTCGGCACGT TCAACGTCCT GCGCCTGGCC
GCCGCCGCGA TGGGCGCGAC CGAGCCGGGG CCGGACGGCG CGCGCGGCGT CGTGGTCAAC
ACCGCCTCCG TCGCCGCCTA CGAGGGCCAG ATCGGCCAGG TCGCCTACGC GTCCTCGAAG
GCCGCGGTGG TCGGCATGAC GCTGCCCGCC GCGCGCGACC TGTCCTCGGT CGGCGTCCGG
GTCATGACCA TCGCGCCCGG CATCGTCGAC ACCCCGATGC TGGCGACCGT GTCCGAGGAG
TTCCGCGCGG GCCTGGCCGC CGGGGTGCCG TTCCCCAAGC GGCTGGCCCT GCCGGACGAG
TACGCGAGGC TGGCGCTGTC GATCATCGAG CACGACTACC TGAACGGCGA GGTCGTCCGG
ATGGACGGCG CGCTGCGCAT GGCGCCCAGG TAG
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| Protein sequence | MEISGTAAIV TGGASGLGAA TARALAARGA RVFALDISVD GAPAVEGVTY LAADVTSEED
VQAAVDTAAG SGAPLRIAVN CAGIGPSTRT VGKAGPHPLD LYRKVLDVNV VGTFNVLRLA
AAAMGATEPG PDGARGVVVN TASVAAYEGQ IGQVAYASSK AAVVGMTLPA ARDLSSVGVR
VMTIAPGIVD TPMLATVSEE FRAGLAAGVP FPKRLALPDE YARLALSIIE HDYLNGEVVR
MDGALRMAPR
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