Gene Amir_0037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAmir_0037 
Symbol 
ID8324182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameActinosynnema mirum DSM 43827 
KingdomBacteria 
Replicon accessionNC_013093 
Strand
Start bp41233 
End bp42615 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content69% 
IMG OID644940575 
Producttranscriptional regulator, XRE family 
Protein accessionYP_003097857 
Protein GI256374197 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAACACCA TCGGTTCGTC GAACTCTCCT GTTACGCCCG AGGTCTGGGA CCAGCAGGAG 
ATGCGCGACG CCCTGGCCAA GCGGGAGATC AGCACGGTCT ACCGGCTGCT GCGCAGGCAC
GGCGTGTCGC AGCGCCAGAT CGCGGCGCTC ACCGGTCAGT CGCAGTCCGA AGTGTCGGAG
ATCCTCAAGG GTCGTCAGGT CATGGCCTAC GACGTCCTGA CCAGGATCGC CAACGGCTTG
GGTGTCCCCA GGGGATACAT GGGCCTCGCC TACGACGAGG CCACGGCAGT GCGGGTGGCC
GCCACGGCGG AGGCACCCCA TTCTGAGGAG GACGAGTCGG TGAAGCGAAG GAAGTTCCTC
GCGCACGCCG CCGCCATCAC CGTCGGTGCG GCCGTGTTCG GCACGGACTC CGGGTCTTGG
ACGGGCTCTC CCGCGCAGAC CCCGGCCCCC GGCCGGATCG GCATGACCGA CGTCCGCCAG
GTCGAGGCCG CCACCAAGGC CCTGCGCACG CTGGACTACC AGTACGGCGG CGGCTCCTGC
CGCGACGCCG TCGTCGCCCA GCTGTCCTGG GGGCAGCAGA TGCTGGGCGC GAACGCGACC
GAGCTGGTCA AGGAGTGGCT GTTCGTCGCG CTCGCCGACC TGCACAACCT CGCGGGCTGG
ACGTCGTTCG ACACCGGGCT GTACGACTCG GCGCGCAACC ACTTCGGGCA GGCGCTCAGC
CTGGCCAAGC AGGGGCGCAA GGAGGAGCTG GTCGCGAACA TCCTGTACCG GATGGGCCGC
GTCTACCTGC ACCAGGACGC CCCGGACGAC GCGCTCAAGG TGTTCCAGCT CGGCCAGCTG
GCCGCGCAGA ACTCCGGCTC CGAGCTCGCG GTCGGCATCC TGTGCGCGAA CGAGGCGTGG
GCCTACGCGA AGATGGGCTC CGACACGCAG GCGCTCAAGC TGCTCGGCAG GGCGCGCGAC
GAGTTCGCCA GGGCCAACGT CGCCGAGGCG CCCGCGTGGG CGCGGTTCTT CGACGCGAAC
GACCTGTCCG CCATGGTCGG CACGGTGCAC ACCGAGCTGG CCCAGACGGT GGACGTCAAG
TACACCCGCA CGGCCATCCC GGCGCTGTCC AAGGCGATCG GCGGCTACGG CGAGGACATG
ACGCGCAGCA AGTCGTTCAA CTTCATCTCG CTGTCGATCA ACCACCTGCT CCAGGGCGAC
CTCGACCACG GCTCCAAGGT CGGGCGCCAG GCGCTCGACC TGTCCGAGAG CCTGAAGTCG
ATCCGCACCA AGGACCGGAT GAAGCCGCTG CTCGGCGAGG CGCAGAAGCG CCGCAACAAC
CAGGACGCCC GTGAGCTCGC CGAACGCGTC TCCAAGTTCA CCGGCACCGA CAGCGCGGCC
TGA
 
Protein sequence
MNTIGSSNSP VTPEVWDQQE MRDALAKREI STVYRLLRRH GVSQRQIAAL TGQSQSEVSE 
ILKGRQVMAY DVLTRIANGL GVPRGYMGLA YDEATAVRVA ATAEAPHSEE DESVKRRKFL
AHAAAITVGA AVFGTDSGSW TGSPAQTPAP GRIGMTDVRQ VEAATKALRT LDYQYGGGSC
RDAVVAQLSW GQQMLGANAT ELVKEWLFVA LADLHNLAGW TSFDTGLYDS ARNHFGQALS
LAKQGRKEEL VANILYRMGR VYLHQDAPDD ALKVFQLGQL AAQNSGSELA VGILCANEAW
AYAKMGSDTQ ALKLLGRARD EFARANVAEA PAWARFFDAN DLSAMVGTVH TELAQTVDVK
YTRTAIPALS KAIGGYGEDM TRSKSFNFIS LSINHLLQGD LDHGSKVGRQ ALDLSESLKS
IRTKDRMKPL LGEAQKRRNN QDARELAERV SKFTGTDSAA