Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0013 |
Symbol | |
ID | 8324157 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 14769 |
End bp | 15317 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644940550 |
Product | Peptidylprolyl isomerase |
Protein accession | YP_003097833 |
Protein GI | 256374173 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAGACA GCAACGAATC GCTCGTCGGG CGCAAGGTGA CGGCGACCCT GCACACCTCG CAGGGCGTCA TCAAGATCAA CCTTTTCCCC GACCACGCCC CCAAGACGGT GGCGAACTTC GTGGGCCTCG CAGAGGGCAC GAAGGCGTAC ACCGAAGCCA ACGCGAAGGG CGAGGCCAGC GGGCCCTTCT ACGACGGTGC GATCTTCCAC CGGGTCATCG CAGGCTTCAT GCTGCAGGGC GGTGACCCCA CGGGCACCGG TCGCGGCGGC CCCGGCTACA AGTTCGCCGA CGAGTTCCAC CCGGAGCTCA AGTTCGACCG CCCCTACCTG CTCGCGATGG CGAACGCCGG GCCCAACACC AACGGCTCCC AGTTCTTCAT CACGGTCGCG CCGACCTCGT GGCTGAACTT CAAGCACACG ATCTTCGGCG AGGTCGCGGA CCAGGACTCC CGCAACGTCG TCGACGCGAT CGAGAACGGT CCGACCGGTG CGGCCGACCG CCCGGTCAAG GACGTCGTCA TCGAGAAGGT CGCGATCGAG AAGGTCTAG
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Protein sequence | MADSNESLVG RKVTATLHTS QGVIKINLFP DHAPKTVANF VGLAEGTKAY TEANAKGEAS GPFYDGAIFH RVIAGFMLQG GDPTGTGRGG PGYKFADEFH PELKFDRPYL LAMANAGPNT NGSQFFITVA PTSWLNFKHT IFGEVADQDS RNVVDAIENG PTGAADRPVK DVVIEKVAIE KV
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