Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Amir_0008 |
Symbol | |
ID | 8324150 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Actinosynnema mirum DSM 43827 |
Kingdom | Bacteria |
Replicon accession | NC_013093 |
Strand | + |
Start bp | 11278 |
End bp | 12144 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644940543 |
Product | hypothetical protein |
Protein accession | YP_003097828 |
Protein GI | 256374168 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.625071 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACTCCAC CCGAGAAAGA GGACCGGGAC GCGGACAAGA CCGCGGTGAT CACCCGGCCG AGCGTCGAGG CGGCCAAGGC GCCCGAGGCG GCAGCCGCGT CATCGGGTGA ACCGGAGAAG AAGCCGGAGG AGGTCGTGAC CACCGCCGTG CCCGCCGCCG CTCCGGAGGC CGCGAAGGCC CCGGAGAAGC CCGCGGAGAA GCCCGTGGAC GAGAGCCCCA CGGTGGCGGT GACGCCCCCG CCGTGGCAGC GGTCGACCAG CGAGGGCGGC TACAGCGAGG CCGCCCAGGT CGGGCCGGGC GACGACGTGA AGCCCGCCGA GGCGGGGGCC CCGGCGTCGC CGGTCTTCCC GTCGCTGGAC CAGGACACGG TGGCGGTGGC CAAGCCGGTC CCGCCCGGCG CCGCTCCGGC GGCTGCCGCG GCGGCGGCGG CGCCGCGCAC AGCGGTGAAC CTGGGCACCC AGTCGAGGCC GCAGGCGTCG TCCTCGGCGC GCCGTCCCGG CAGGGGACCC CGGCGGGCCA GCCTGCAGGT GAAGCGGGTC GACCCGTGGT CGGTCCTGAA GCTCGCGCTG GTGCTCAGCG TGGCGCTGTT CTTCGTCTGG CTGGTCGCGG TCGGCGTGCT GTACGGCGTG CTGAACGGCA TGGGCGTGTG GGACAAGATC AACAACACCG CGAACGACCT CCTCCAGAGC GAGGAGGCCA GCGGTGACCC GTTGATCAGC GCGGGTCGGG TGTTCGGCGT GTCCGCCATC GTGGGCGCGG TCAACATCGT CCTGTTCACC GCGCTGGCCA CCGTGGGCGC CTTCGTCTAC AACGTCTCGG CCGATCTCGC AGGCGGCTTG GAGGTCACGC TCTCCGAGCG TGAGTGA
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Protein sequence | MTPPEKEDRD ADKTAVITRP SVEAAKAPEA AAASSGEPEK KPEEVVTTAV PAAAPEAAKA PEKPAEKPVD ESPTVAVTPP PWQRSTSEGG YSEAAQVGPG DDVKPAEAGA PASPVFPSLD QDTVAVAKPV PPGAAPAAAA AAAAPRTAVN LGTQSRPQAS SSARRPGRGP RRASLQVKRV DPWSVLKLAL VLSVALFFVW LVAVGVLYGV LNGMGVWDKI NNTANDLLQS EEASGDPLIS AGRVFGVSAI VGAVNIVLFT ALATVGAFVY NVSADLAGGL EVTLSERE
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