| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4281 |
|---|
| Symbol | |
|---|
| ID | 8255417 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 5159654 |
|---|
| End bp | 5160904 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 644937947 |
|---|
| Product | metal-dependent phosphohydrolase HD sub domain protein |
|---|
| Protein accession | YP_003094534 |
|---|
| Protein GI | 255534162 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1078] HD superfamily phosphohydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.282547 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 51 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGTACCGTA TAATTTATTT TCAAGGATTG AACAAGAAGA AAATCATAAA TGATCCAGTA
TATGGCTTCA TCAATATCCC TTCTGAAATC GTATTTGACC TGATCTCACA TCCGTATTTT
CAAAGATTAA GATATATTAA GCAATTGGGG ATGACGCACC TGGTATATCC GGGGGCCTTG
CACACGCGTT TTCACCATGC TATAGGTGCC ATGCACCTGA TGAGCCTGGC CATTGAGGTG
TTGAGGGGCA AGGGGCAGGA CATTACGGCC GAAGAGGAAG AGGCTGCAAC GATAGCCATT
TTGCTGCATG ACATTGGGCA CGGGCCTTTC TCGCATGCAC TGGAGCATAC ATTGGTAAAC
GAAATTAAGC ATGAAGACAT TTCCATGCGG CTGATGGAAA AGCTGAACGA AGCCTTTGAT
GGTCGCTTAA CGCTGGCCAT AAGGATTTTT AAAGGCGATT ATCCCAAACA TTTCCTGCCA
CAGCTGGTTT CGAGCCAGCT GGATCTGGAC CGGATGGATT ACCTGAACCG CGACAGTTTT
TTTACGGGAG TAAGTGAAGG GGTGATCAGT TTTGACCGCA TCATTAAGAT GTTTAATGTA
CTGGATGAGG AATTGGTCAT AGAAGAAAAG GGCATTTATT CGATCGAAAA GTTTCTGATT
GCACGCAGGT TGATGTACTG GCAGGTTTAC CTGCATAAAA CAGTGATTGC GGGCGAAATG
CTGCTGGTAA AAATTCTGGA AAGGGCAAAA TACCTGGCTT CTCATGGCGA GGCTTTGTTT
GCTACGCCGG CATTGCAGCA TTTTTTAAAA AATGAAATTA CGGAAAAGGA GTTTTTTAAA
GGGGATTTGC ACCTGGAACA ATTTTCGAAG CTGGACGACC AGGATATTTT TGCTTCGGTA
AAGGTTTGGG CCGAGCATCC GGACAGGATC CTTTCCCAGC TTTGTGGCAT GCTTAACCAA
AGAAACCTTT ATAAGGTAGA GATCAGCAAT GATGCGCCCG ATGAAAGCCG GGTAGCCGAA
CTGAGGGCCA GGACTGCTGC ATTTTTAAAC CTGAACCAAA AAGATGTCTG TTATTTTGTA
TTTACAGATA TGATCAGGAA CCGGGCCTAT AATGCCGGCA GCGGCAACAT CAACATCCTG
TTGAAAAACA ATACGATCAT TGATATTGCA AAAGCTTCGG ATTTATCTAA CTTAGAATCT
TTAGACAAGA CTGTGAAAAA ACATATATTA TGCTATCCAC GAATTATTTA G
|
|---|
| Protein sequence | MYRIIYFQGL NKKKIINDPV YGFINIPSEI VFDLISHPYF QRLRYIKQLG MTHLVYPGAL
HTRFHHAIGA MHLMSLAIEV LRGKGQDITA EEEEAATIAI LLHDIGHGPF SHALEHTLVN
EIKHEDISMR LMEKLNEAFD GRLTLAIRIF KGDYPKHFLP QLVSSQLDLD RMDYLNRDSF
FTGVSEGVIS FDRIIKMFNV LDEELVIEEK GIYSIEKFLI ARRLMYWQVY LHKTVIAGEM
LLVKILERAK YLASHGEALF ATPALQHFLK NEITEKEFFK GDLHLEQFSK LDDQDIFASV
KVWAEHPDRI LSQLCGMLNQ RNLYKVEISN DAPDESRVAE LRARTAAFLN LNQKDVCYFV
FTDMIRNRAY NAGSGNINIL LKNNTIIDIA KASDLSNLES LDKTVKKHIL CYPRII
|
|---|
| |