Gene Phep_4275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4275 
Symbol 
ID8255411 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5154066 
End bp5154626 
Gene Length561 bp 
Protein Length186 aa 
Translation table11 
GC content47% 
IMG OID644937941 
Product5-formyltetrahydrofolate cyclo-ligase 
Protein accessionYP_003094528 
Protein GI255534156 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0212] 5-formyltetrahydrofolate cyclo-ligase 
TIGRFAM ID[TIGR02727] 5,10-methenyltetrahydrofolate synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0203363 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAAAG CGGAAATTAG AAAAAAGGCT GTTGTACAGC GTAGAGGGCT TTCTGAAGAA 
GAAATAGCTG TTTATAGCCA GCGATTGTTG TCCCATTTCA CTTCATTTAA TCTGACCGGC
GTACATACCA TTCATGTGTT TCTTCCTATA GCAGAACAGA AGGAGCCGGA TACCTTTTTG
TTTATAGACT GGCTGGCCCG GCTGCACCCC GAGATCAGGA TCATAGTGCC TAAGGCTGAT
TTTGAGACGG CCTTAATGCA TAATTATGTG TATACGGGCA GGGAGGGGCT GCTGAAAAAT
ATTTACAAGA TCCTGGAGCC TGCCGGTGGC GAACTGCATA CCGGAGCGGT AGATATGGTG
CTGGTACCGA TGCTCGCCTT TGACCTCCGG GGTTACCGCG CAGGCTACGG AAAGGGTTTT
TACGACCGTT TTTTGCAGGG ATTGGATACC CGGAAAATAG GTCTATCGTT CTTTGGTCCG
GTTGAAGAGA TTGATGATAT CAATGTGCAT GATGTGGCGC TGGATTGTTG CATCACCCCC
GAAAAAGTAT ATTATTTTTA G
 
Protein sequence
MTKAEIRKKA VVQRRGLSEE EIAVYSQRLL SHFTSFNLTG VHTIHVFLPI AEQKEPDTFL 
FIDWLARLHP EIRIIVPKAD FETALMHNYV YTGREGLLKN IYKILEPAGG ELHTGAVDMV
LVPMLAFDLR GYRAGYGKGF YDRFLQGLDT RKIGLSFFGP VEEIDDINVH DVALDCCITP
EKVYYF