Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4275 |
Symbol | |
ID | 8255411 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 5154066 |
End bp | 5154626 |
Gene Length | 561 bp |
Protein Length | 186 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644937941 |
Product | 5-formyltetrahydrofolate cyclo-ligase |
Protein accession | YP_003094528 |
Protein GI | 255534156 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0212] 5-formyltetrahydrofolate cyclo-ligase |
TIGRFAM ID | [TIGR02727] 5,10-methenyltetrahydrofolate synthetase |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.0203363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAAAAG CGGAAATTAG AAAAAAGGCT GTTGTACAGC GTAGAGGGCT TTCTGAAGAA GAAATAGCTG TTTATAGCCA GCGATTGTTG TCCCATTTCA CTTCATTTAA TCTGACCGGC GTACATACCA TTCATGTGTT TCTTCCTATA GCAGAACAGA AGGAGCCGGA TACCTTTTTG TTTATAGACT GGCTGGCCCG GCTGCACCCC GAGATCAGGA TCATAGTGCC TAAGGCTGAT TTTGAGACGG CCTTAATGCA TAATTATGTG TATACGGGCA GGGAGGGGCT GCTGAAAAAT ATTTACAAGA TCCTGGAGCC TGCCGGTGGC GAACTGCATA CCGGAGCGGT AGATATGGTG CTGGTACCGA TGCTCGCCTT TGACCTCCGG GGTTACCGCG CAGGCTACGG AAAGGGTTTT TACGACCGTT TTTTGCAGGG ATTGGATACC CGGAAAATAG GTCTATCGTT CTTTGGTCCG GTTGAAGAGA TTGATGATAT CAATGTGCAT GATGTGGCGC TGGATTGTTG CATCACCCCC GAAAAAGTAT ATTATTTTTA G
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Protein sequence | MTKAEIRKKA VVQRRGLSEE EIAVYSQRLL SHFTSFNLTG VHTIHVFLPI AEQKEPDTFL FIDWLARLHP EIRIIVPKAD FETALMHNYV YTGREGLLKN IYKILEPAGG ELHTGAVDMV LVPMLAFDLR GYRAGYGKGF YDRFLQGLDT RKIGLSFFGP VEEIDDINVH DVALDCCITP EKVYYF
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