Gene Phep_4262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4262 
Symbol 
ID8255398 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5139046 
End bp5140593 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content49% 
IMG OID644937928 
Productdrug resistance transporter, EmrB/QacA subfamily 
Protein accessionYP_003094515 
Protein GI255534143 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGAGA AAGGTTTAAA AAAGTGGATC ATCACCTTTA CAGTGATCAC AGCTTCTCTT 
TTGGAGCTGA TTGATACCAC CATTGTAAAC GTGGCGATCC CTCAGATACA GGGCAACCTG
GGCGCAACAC TCGAAGATGT GGCCTGGTTG TCTACCGGTT ATGCAGTTGC CAATGTAATT
GTATTGCCGA TGTCCGGCTG GCTTGGCAGC CGTTTCGGAC GAAAAAACTA TTTCCTGTTT
TCCATCGTCC TGTTCACCGT AGCCTCTTTT CTCTGTGGTA ATGCAACTAA CCTGGAAGAG
CTGATCGCTT TCCGCATTTT GCAGGGTCTT GCAGGTGGGG GTTTAATTTC AACTGCCCAG
GCCATCTTAA TTGAAACCTG GCCCCGCGAG GATGTGGGTA TCGCAACTGC TTTATTTGGT
TTGGGTGCGG TAGTAGGCCC CACTGTTGGC CCCACAATTG GTGGTTACCT GCTCGAGATC
AGCACCTGGC CGCTTATATT TTATGTAAAC ATTCCCGTCG GCATCCTCGC CGCGTACTGT
ACGTATATGT TTGTACGGGA AACGCCGAAG GATGGCAAAG GTATGCCGGT CGACTGGTGG
GGAATTGTAT TATTGGCCGT TGCGGTAGGT AGCTTACAGA CCGTATTGGA AAAAGGGGAA
AGTGAGGACT GGTTTGCTAC GCCTTACATC ACGGCGCTCG CCGTAACTTC GGTACTTGGC
CTGCTCCTGT TCATCTGGAG AGAGCTGAGT ACAGACCACC CTATTGTAAA CTTCAAGATC
ATGCGCCACC GCAGTTTTTC TGTGGGGATG TTCACCTCAT TTATTTTAGG CTTTGGTTTA
TACGGATCCG TATTCGTGTT CCCTGTATTC TGCCAGAATT TACTGGGCTT CTCTCCGCTT
CAGACAGGAG AACTGCTCTT TCCCGGGGGG CTCTGTACCA TCGTGATGAT GCCTTTTATC
GGAATTATGC TCAAGAAAAA CATTCCTGCC CAGTTTATGG CAACCATAGG GATGTTCCTC
TTTTTTGTAT TCTGCTCTAT GCTCAGCAAG TCCACCCTGC AATCGGGCAC CAATGATTTC
TTCCTGCCCC TGATGATCAG AGGTGTGGGT ATGGCCCTGT TATTTGTACC GCTTACCACC
TTGGCCATTC AGGACCTTAA AGGGGCTGAA ATTGGCCAGG GTTCAGGCCT CAATAACATG
ATGAGACAGT TGGGTGGTTC ATTTGGTATT GCCGCTTTAA CTACCCTCAT CCATGTGCGT
CAGGGTTTTC ACCGCAGCAA TCTGCTGGTC AACATCAACG AATACAATCC GGCTTTTACC
GACCGCTTTA ACGGCTTTAT CCAAAATTTT ATGGCCAAAG GCTATACTTA TCTGGATGCA
AAGGCCCTGG CCACAAAAGC TATAGAAGGC ACTGTAACCA AACAGGCATT GCTGCTCACT
TACAGTGATG CGTACTGGGT GGCCGGGCTG ATCCTTTTGT GTTCTATCCC GCTCCTGTAT
CTTCAGAAAT TTAAAAAGAA CGTTGCCGTT CCGGCAGATC TGCATTAA
 
Protein sequence
MAEKGLKKWI ITFTVITASL LELIDTTIVN VAIPQIQGNL GATLEDVAWL STGYAVANVI 
VLPMSGWLGS RFGRKNYFLF SIVLFTVASF LCGNATNLEE LIAFRILQGL AGGGLISTAQ
AILIETWPRE DVGIATALFG LGAVVGPTVG PTIGGYLLEI STWPLIFYVN IPVGILAAYC
TYMFVRETPK DGKGMPVDWW GIVLLAVAVG SLQTVLEKGE SEDWFATPYI TALAVTSVLG
LLLFIWRELS TDHPIVNFKI MRHRSFSVGM FTSFILGFGL YGSVFVFPVF CQNLLGFSPL
QTGELLFPGG LCTIVMMPFI GIMLKKNIPA QFMATIGMFL FFVFCSMLSK STLQSGTNDF
FLPLMIRGVG MALLFVPLTT LAIQDLKGAE IGQGSGLNNM MRQLGGSFGI AALTTLIHVR
QGFHRSNLLV NINEYNPAFT DRFNGFIQNF MAKGYTYLDA KALATKAIEG TVTKQALLLT
YSDAYWVAGL ILLCSIPLLY LQKFKKNVAV PADLH