Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4242 |
Symbol | |
ID | 8255378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 5118186 |
End bp | 5119016 |
Gene Length | 831 bp |
Protein Length | 276 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644937908 |
Product | N-acetylmuramoyl-L-alanine amidase family 2 |
Protein accession | YP_003094495 |
Protein GI | 255534123 |
COG category | [V] Defense mechanisms |
COG ID | [COG3023] Negative regulator of beta-lactamase expression |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.26707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATACAAC TGCATTTTAA ACGTCACTAC CTTTACTTTA TCCCGCTGTT TTTACTTACG GCATGCTCAA CAAACAAGTA TGCTGCTACC AATAAGGTGT ACAAAAAACA GGCTGCGGGC TTTGCCGAGA CCATAAAAGC GGCACCGCCG TTAAACCAGG GCATAGATTC GTTACCGGCC AATCCTTTGT CCTGGGTAGG CTCCGTTAAT TTTGGCATCC GTAAACCAAA TTTTGTAGTG CTGCACCATA CCGCACAGGA TTCTTCGGCC CAAACTTTAA AGACCTTTAC CATTACACGG ACACAGGTAA GCTCTCATTA TGTAATTGGC CGTGATGGAA AAGTATTTCA GATGGTAAAC GATTACTTGA GGGCAAACCA TGCGGGTGTG TCCAGGTGGG GAAATGAAAT GGACCTCAAT TCTTCGTCTA TTGGGATAGA GATAGACAAT AATGGAAAAG AACCTTATTC GGAAGTACAG ATAAAAAGTT TGATCACGGT ACTTCGGGCA TTAAAAAAGA GATACGGCAT CCCTACGGCA AATTTTATAG GCCATGCGGA TATTGCGCCG GGACGTAAAA ACGACCCGAG GAATTTTCCA TGGAAAAGAA TGGCGGCAGA AGGTTTTGGC TTTTGGTATG ATGATGTGCT GGTGATGCCG CCTGACGATT TTGATGCGGT AGCTGCATTG AGGATTATAG GTTATAATGT AAAAAACCTG AATGCTGCAA TTGAAGCGTT TAAGATCCAC TTTGTGCAGA CAGACATTAG CCAGGTGCTT ACGCCGGCAG ATAAGCTGAT CCTGTTTAAC GTATATAAAA AATACATGTA A
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Protein sequence | MIQLHFKRHY LYFIPLFLLT ACSTNKYAAT NKVYKKQAAG FAETIKAAPP LNQGIDSLPA NPLSWVGSVN FGIRKPNFVV LHHTAQDSSA QTLKTFTITR TQVSSHYVIG RDGKVFQMVN DYLRANHAGV SRWGNEMDLN SSSIGIEIDN NGKEPYSEVQ IKSLITVLRA LKKRYGIPTA NFIGHADIAP GRKNDPRNFP WKRMAAEGFG FWYDDVLVMP PDDFDAVAAL RIIGYNVKNL NAAIEAFKIH FVQTDISQVL TPADKLILFN VYKKYM
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