Gene Phep_4242 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4242 
Symbol 
ID8255378 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5118186 
End bp5119016 
Gene Length831 bp 
Protein Length276 aa 
Translation table11 
GC content43% 
IMG OID644937908 
ProductN-acetylmuramoyl-L-alanine amidase family 2 
Protein accessionYP_003094495 
Protein GI255534123 
COG category[V] Defense mechanisms 
COG ID[COG3023] Negative regulator of beta-lactamase expression 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.26707 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATACAAC TGCATTTTAA ACGTCACTAC CTTTACTTTA TCCCGCTGTT TTTACTTACG 
GCATGCTCAA CAAACAAGTA TGCTGCTACC AATAAGGTGT ACAAAAAACA GGCTGCGGGC
TTTGCCGAGA CCATAAAAGC GGCACCGCCG TTAAACCAGG GCATAGATTC GTTACCGGCC
AATCCTTTGT CCTGGGTAGG CTCCGTTAAT TTTGGCATCC GTAAACCAAA TTTTGTAGTG
CTGCACCATA CCGCACAGGA TTCTTCGGCC CAAACTTTAA AGACCTTTAC CATTACACGG
ACACAGGTAA GCTCTCATTA TGTAATTGGC CGTGATGGAA AAGTATTTCA GATGGTAAAC
GATTACTTGA GGGCAAACCA TGCGGGTGTG TCCAGGTGGG GAAATGAAAT GGACCTCAAT
TCTTCGTCTA TTGGGATAGA GATAGACAAT AATGGAAAAG AACCTTATTC GGAAGTACAG
ATAAAAAGTT TGATCACGGT ACTTCGGGCA TTAAAAAAGA GATACGGCAT CCCTACGGCA
AATTTTATAG GCCATGCGGA TATTGCGCCG GGACGTAAAA ACGACCCGAG GAATTTTCCA
TGGAAAAGAA TGGCGGCAGA AGGTTTTGGC TTTTGGTATG ATGATGTGCT GGTGATGCCG
CCTGACGATT TTGATGCGGT AGCTGCATTG AGGATTATAG GTTATAATGT AAAAAACCTG
AATGCTGCAA TTGAAGCGTT TAAGATCCAC TTTGTGCAGA CAGACATTAG CCAGGTGCTT
ACGCCGGCAG ATAAGCTGAT CCTGTTTAAC GTATATAAAA AATACATGTA A
 
Protein sequence
MIQLHFKRHY LYFIPLFLLT ACSTNKYAAT NKVYKKQAAG FAETIKAAPP LNQGIDSLPA 
NPLSWVGSVN FGIRKPNFVV LHHTAQDSSA QTLKTFTITR TQVSSHYVIG RDGKVFQMVN
DYLRANHAGV SRWGNEMDLN SSSIGIEIDN NGKEPYSEVQ IKSLITVLRA LKKRYGIPTA
NFIGHADIAP GRKNDPRNFP WKRMAAEGFG FWYDDVLVMP PDDFDAVAAL RIIGYNVKNL
NAAIEAFKIH FVQTDISQVL TPADKLILFN VYKKYM