Gene Phep_4239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4239 
Symbol 
ID8255375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5115208 
End bp5115990 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content46% 
IMG OID644937905 
ProductEnoyl-CoA hydratase/isomerase 
Protein accessionYP_003094492 
Protein GI255534120 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTATC AGCACATTTT ATCCGTATTA AAAGAACAGG TATTGTATGT CACCATTAAC 
AGGGAGCAAA AGTTAAATGC CTTAAATAAA GAAACATTGG CCGAACTGGC CCATGTGATT
GAATATGCAG CCGGAAATGA TGAAATAAGA GGGGTTTTGC TGACAGGTGC CGGAGAAAAG
GCATTTGTAG CCGGAGCTGA TATTTCGGAG TTTTCTGATT ACAATGCTGC GCAGGGAGAA
GCGCTGGCCA GAAATGGGCA GGAGCATGTT TTTGATGCGA TAGAAAAATG CCCTAAGCCG
GTTGTTGCTG CTATTAATGG TTTTGCCCTG GGCGGGGGGC TGGAGCTGGC CATGGCCTGT
CACATCCGTG TGGCTTCGGA AAATGCCAGA TTGGGCTTAC CAGAGACCTC TTTGGGCCTG
ATTCCGGGTT ATGGGGGAAC GCAGCGGTTA ACCCAATTGG TAGGGAAAGG GCGGGCCCTG
GAAATGATTG CCACTGCCGA TATGATCTCT GCAGAACAGG CAGAAAGAAT TGGCCTGGTA
AATTATGTAG TTCCACAGGC AGAACTGATT GCCAAAGCAG CATCTATTTT TGCTAAAATT
AAATTGCGTG CTCCCCTGGC CATAGCTGCT GCAATAAAAG CTGTCAACGC CGCACATACT
TTTGATGTAA ACGGCTTTGA AACGGAGATT GAAGAATTTG GAAAGTGTTT TAACACCCAG
GATTTCAAGG AAGGGACAGG TGCTTTTTTA GAAAAGAGAA AACCCCTGTT TATCGGGAAA
TAG
 
Protein sequence
MTYQHILSVL KEQVLYVTIN REQKLNALNK ETLAELAHVI EYAAGNDEIR GVLLTGAGEK 
AFVAGADISE FSDYNAAQGE ALARNGQEHV FDAIEKCPKP VVAAINGFAL GGGLELAMAC
HIRVASENAR LGLPETSLGL IPGYGGTQRL TQLVGKGRAL EMIATADMIS AEQAERIGLV
NYVVPQAELI AKAASIFAKI KLRAPLAIAA AIKAVNAAHT FDVNGFETEI EEFGKCFNTQ
DFKEGTGAFL EKRKPLFIGK