| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4238 |
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| Symbol | |
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| ID | 8255374 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5113643 |
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| End bp | 5115046 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937904 |
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| Product | sigma-54 factor interaction domain-containing protein |
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| Protein accession | YP_003094491 |
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| Protein GI | 255534119 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAAAAA TATTAATTGT TGATGATGAA ATAAATATTG GGATACTATT ATCTAAATTT
TTAACGCGAA ATTCTTTTAG TGTGTCGACG GCTACAAGTG GTGTTTCGGC GATGGAATAT
CTGGCTAAAG AGTATTATGA TCTGGTTTTA TGCGATTATC GTCTGGAAGA TACAGATGGC
AAGGAAATGC TGATCAAAAT AAAAGAGAAA TATCCAAGAA CAGGAGTGAT CATCATCACA
GGCTACTCTG ATATTAAGCT TGCGGTAGAA CTGATCAAGC TGGGCGCTTA CGATTACATT
ACCAAGCCCC TTTATCCGGA CGAGATCCTG AATACGATCA ATAAATCTAT TGAAACGCAG
ATGGCGCTGA ATGATGCAGC CTTGCCAGAG GTTTCTGAAG CGCCTAAACA GCGTGCCCAG
AAACAACAGC TGTACAACCA GACGGATAAC TTTGTTGCTG GCCAGAGCAA TGCTTCGAGG
CATTTGCTAA AACAGATCCA ATTGGTGGCA CCAACTTCTT ACAGTGTAAT TTTGACTGGA
GAAAGTGGTA CAGGTAAGGA ATCTGTGGCA AAGGCCATCC ATTTGAACAG TCCGAGAAAA
GACAATCCAT TTGTGGCGAT GGATTGCGGA TCCCTGACCA AGGAGCTTGC CGGAAGCGAG
TTTTTCGGAC ATGAAAAAGG TTCTTTTACA GGAGCCTTAT ATACCAAGAT CGGCCATTTT
GAAATGGCGA ATGGCGGTAC GCTGTTTCTG GATGAGGTTG GAAACCTTTC TTACGACATA
CAGGCAGCTT TACTGAGGAC TGTACAGGAA CGCAAAATAA AACGTATTGG CAGTACTAAA
GAAATTGACC TGGATGTTCG CATCATTGTG GCGACCAACG AGAACCTTGC CAATGCCATT
CAAAAAGGGA AGTTCAGGGA GGATCTGTAC CATCGCTTTA ATGAATTCTC TATCGACCTT
CCTCCGCTGA GCCAGCGTGG AAGGGATATC CTGATTTTTG CCAATACCTT TCTGGAAGTG
GCCAATCAGG AACTGGGCAG GAGTGTACAG GGTTTTTCGC AGGAAGTTGA AGATTGTTTT
CTGACCTATA ACTGGCCAGG TAATGTAAGG GAACTGAAAA ATGTGATCAG AAGGGCTACC
TTGCTTACTG AAAATCAGGA AATTCAGCTA AAGGCCCTTC CACTTGAAAT TTCTACTTAT
GCCAGGGCAA ATGCCATAGA AAATACCATG TCGCGCAATG AACGGCCAAG GGATTTAAAA
AACGCAGCTT TAGAAGCGGA GTACGATGCC ATTTTAAAGG TTTTGAGGGA AGTGAATTTT
AATAAGACCA AGGCTGCAAA AATCCTGAAT ATAGACCGTA AAACACTATA CAATAAAATG
AGGGCCATAA ACCTGGAAAA ATAG
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| Protein sequence | MRKILIVDDE INIGILLSKF LTRNSFSVST ATSGVSAMEY LAKEYYDLVL CDYRLEDTDG
KEMLIKIKEK YPRTGVIIIT GYSDIKLAVE LIKLGAYDYI TKPLYPDEIL NTINKSIETQ
MALNDAALPE VSEAPKQRAQ KQQLYNQTDN FVAGQSNASR HLLKQIQLVA PTSYSVILTG
ESGTGKESVA KAIHLNSPRK DNPFVAMDCG SLTKELAGSE FFGHEKGSFT GALYTKIGHF
EMANGGTLFL DEVGNLSYDI QAALLRTVQE RKIKRIGSTK EIDLDVRIIV ATNENLANAI
QKGKFREDLY HRFNEFSIDL PPLSQRGRDI LIFANTFLEV ANQELGRSVQ GFSQEVEDCF
LTYNWPGNVR ELKNVIRRAT LLTENQEIQL KALPLEISTY ARANAIENTM SRNERPRDLK
NAALEAEYDA ILKVLREVNF NKTKAAKILN IDRKTLYNKM RAINLEK
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