Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4228 |
Symbol | |
ID | 8255364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 5105276 |
End bp | 5106331 |
Gene Length | 1056 bp |
Protein Length | 351 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 644937894 |
Product | hypothetical protein |
Protein accession | YP_003094481 |
Protein GI | 255534109 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.17212 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTTCTT TTTTTGAGGC CTCACTGGCC GAATTATCTA TACACCGAAT CGGGAACAAG TCTGAAGAGG AGTTTTACGT ATTGTCTGAA AAATCTTTAA TGATTAAAGA CCCCATGCTG AGTAACCTAT TGCAGCAATA TTTTTTAGGC CCTTACGAAA AGGTGAACGA AGTATATCGT TTTATTCATC CAAATGGTGA CCTGAACCTT AATGAAGCGT ATCATTTTGC CGCAGCCATT TTTGAAAAGG GAGAAACCTT TCATGAGAAC AGCAAACAAC TGGCTAAATA CCTGTATGAT GTTTCGGGTC ATCCGAAGAT TAAACCCGGT GAACTGTATG TGGCCTATTT TGAAAATGTG CAGATAGAAG GAGAGCTGCA TGATGCTATC GGGATCTTTA AATCAGAGAC CAAGGAGAGT TATTTAAAAG TTTTTCCGGA GCAGGATGGC TTTGGCTTAA GTTATGAGCA GGAAGCCATT AACATCAATA AGCTGGATAA AGGCTGCCTG ATTTTCAATA CAGATAAAGC AGAAGGTTTT CGGGTAGCAG TGATTGACCA GACCAACAGA AGTGCAGAAG CGGTATACTG GAAGGATGAG TTTTTGAAGC TGAAGATCAG GAATGATAAT TTTAACCAGA CCAGCAGTGT GCTGGGGGTA TATAAAAACT TTGTCACTGA AAAGCTGGAT GAGGAATTTG AAATCTCGAA GGCAGATAAA ATAGATCTGC TGAACAAATC CATGAAGTAC TTTAAGGAAA AGGAGAGCTT TGACCTGGAA GAGTTCTCGA ATGAAGTGAT TGGCAATGCA GAAGGGATAG CCTCTTTTAA AAACTATAAG AAAAGCTTTG AAGAAGAATT TGACCAGCCT ATTCCGGATA GCTTTGACAT TTCCGGGGCT GCGGTAAAAA AACAGGCCAG GGTTTATAAA AGCGTATTAA AGCTGGACAA GAACTTTCAC ATCTATATTC ATGGCGATAA AGAGCTGATC GAAAAAGGCT TTGATGACGA TAAATCTATG AATTATTATA AGGTGTTTTT TAGGGAAGAG CAATAG
|
Protein sequence | MISFFEASLA ELSIHRIGNK SEEEFYVLSE KSLMIKDPML SNLLQQYFLG PYEKVNEVYR FIHPNGDLNL NEAYHFAAAI FEKGETFHEN SKQLAKYLYD VSGHPKIKPG ELYVAYFENV QIEGELHDAI GIFKSETKES YLKVFPEQDG FGLSYEQEAI NINKLDKGCL IFNTDKAEGF RVAVIDQTNR SAEAVYWKDE FLKLKIRNDN FNQTSSVLGV YKNFVTEKLD EEFEISKADK IDLLNKSMKY FKEKESFDLE EFSNEVIGNA EGIASFKNYK KSFEEEFDQP IPDSFDISGA AVKKQARVYK SVLKLDKNFH IYIHGDKELI EKGFDDDKSM NYYKVFFREE Q
|
| |