Gene Phep_4222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4222 
Symbol 
ID8255358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5100472 
End bp5100945 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content46% 
IMG OID644937888 
ProductCMP/dCMP deaminase zinc-binding 
Protein accessionYP_003094475 
Protein GI255534103 
COG category[F] Nucleotide transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0590] Cytosine/adenosine deaminases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATT ATAATTTTTC AGCAGAAGAG AACTCTGCGG CAGAGGATGA ACATTTTATG 
CGCCTGGCCT TGCAGGAAGC ACAAAAAGCT TATGATTTAA AGGAAATCCC GATTGGGGCC
ATTGTGGTTT GTAAAGGCAA AATAGTAGGC CGGGGGCATA ATTTAACTGA GCAGCTGAAC
GATGTGACGG CACATGCAGA AATGCAGGCT TTTACAGCGG CATCACAGAC CTTAGGGGGC
AAATATTTAA AAGATTGCAC CCTGTACGTA ACCATTGAGC CTTGTGTAAT GTGTGCCGGG
GCAAGTTACT GGACACAGAT CGGCAAGCTG GTGTATGGCG CCCCTGAACC CAAAAGAGGT
TTTACCACAA AAAGCAATCA ATTGCTGCAC CCAAAAACGG TTTTGAAGAG CGGGGTTTTG
GCACAGGAGT GCGGGGCATT GATGACAAAA TTCTTTGCAG ATAAAAGGGG CTAA
 
Protein sequence
MSYYNFSAEE NSAAEDEHFM RLALQEAQKA YDLKEIPIGA IVVCKGKIVG RGHNLTEQLN 
DVTAHAEMQA FTAASQTLGG KYLKDCTLYV TIEPCVMCAG ASYWTQIGKL VYGAPEPKRG
FTTKSNQLLH PKTVLKSGVL AQECGALMTK FFADKRG