| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4189 |
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| Symbol | |
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| ID | 8255324 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5068478 |
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| End bp | 5069173 |
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| Gene Length | 696 bp |
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| Protein Length | 231 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937854 |
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| Product | LytTr DNA-binding region |
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| Protein accession | YP_003094442 |
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| Protein GI | 255534070 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.537023 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTGCT TAATTGTAGA TGACAATATT ATAGCGCTCG CTGTGCTCAA AAAGCTGATC
AGTATGGAAC CTACACTGAC AGTGGTGGGG GAATGTTTTG ATGCTGTTGA AGCTTACAAA
CAAATTCAGA CAAAGGAAGT AGATATCTTA TTTCTAGATA TAGAAATGCC GGATATGAGC
GGCATAGAAC TGGTGAAAAG TTTAGGCGAT AAACGGCCAA TGGTTATCTT TACTACTTCT
ACAATAGGGT ATGCCGCTGA GGCCTTTGAC CTAAATGTGG TTGATTTTCT GATCAAGCCC
GTTAGCCCTG CGCGGTTTCT GCAGGCGGTA GAAAAGGCAA AGCGGGTGTT GCTTACCAAA
GGTTTGTCTG TTGCGGATAA AGAAGATGAG TTTGTGTTTA TACGTGATTC CAATGTGGTG
CGCAGAGTTA AGGTGAGCGA TATTTTATAT ATGGAGGCCC GGGGTGATTA TGTCAGAATC
AACTTGACCG ATCATACCTA TTCCATCCAC TCTTCTTTAA AATCGGTAGA AGAAAAATTA
TCTAAAAATA TGTTTCTGAG GGTACACCGC TCATTTATCA TCAATGTCGG AAAAATAGAT
ACCATTGAGG GCGGAACACT GATCGTGCAC CGCAATATGG TTCCTGTATC GGATGCTTAT
CGGGCAACTT TATATAAGAG AATGCAAATC CTGTAA
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| Protein sequence | MNCLIVDDNI IALAVLKKLI SMEPTLTVVG ECFDAVEAYK QIQTKEVDIL FLDIEMPDMS
GIELVKSLGD KRPMVIFTTS TIGYAAEAFD LNVVDFLIKP VSPARFLQAV EKAKRVLLTK
GLSVADKEDE FVFIRDSNVV RRVKVSDILY MEARGDYVRI NLTDHTYSIH SSLKSVEEKL
SKNMFLRVHR SFIINVGKID TIEGGTLIVH RNMVPVSDAY RATLYKRMQI L
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