Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4185 |
Symbol | |
ID | 8255320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 5065060 |
End bp | 5065704 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644937850 |
Product | hypothetical protein |
Protein accession | YP_003094438 |
Protein GI | 255534066 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.279246 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAACGAT TATTCATTAT AGCACTGGGT ATAACCGCAG GAAGTTTAGC TTTCAGGGCA GATGCCCAAA CCTCACAAAG GGCAGCAAAT GACAAGATGA GATTTGGTAT TAAGGCAGGT GCCAACCTGA TGAAAATGGG TAAGGTACAA TTTGGAGACC AACTGTATTC AACAGATTAC CGGGTAGGGT TCCAGGCAGG TATCTACGCT GATTTGCCGA TGGGCGGAAA TTTTGCTTTT ATGCCAGAAG CAACCTTTAC ACAAAAAGGT GGCAAACTAA AAGAAACAGT TTCAGGTAAT ACCGGAGAAT TTGACAGTAA GGTATCTTAT ATTGATATTC CCGTACTGAT CGGTTATAAG GCCAGCCCCG AATTAACTGT TTTTGCAGGA CCCCAGGTTT CTTTTTTACT GGACCAGAAA TCAACCATCA AATCCAATGG CAATGAAATT GTGTCCAGCA GCAGCAAGGA AAACTTTGAA AAATCTATTG CCGGAGCTGC CATAGGGCTT GGTTATGCCA TTACACCTAA CATCAACGTA AATGGCAGGT ACACGATGGA CTTCCAAAGA GCATTTAAAG AGAATGTAAA TCAGGATAAA GTTAAAAACA GTGGTTTTGC CTTATCGCTT GGTTATACAT TTTAA
|
Protein sequence | MKRLFIIALG ITAGSLAFRA DAQTSQRAAN DKMRFGIKAG ANLMKMGKVQ FGDQLYSTDY RVGFQAGIYA DLPMGGNFAF MPEATFTQKG GKLKETVSGN TGEFDSKVSY IDIPVLIGYK ASPELTVFAG PQVSFLLDQK STIKSNGNEI VSSSSKENFE KSIAGAAIGL GYAITPNINV NGRYTMDFQR AFKENVNQDK VKNSGFALSL GYTF
|
| |