| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4183 |
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| Symbol | |
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| ID | 8255318 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5062084 |
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| End bp | 5063790 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937848 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003094436 |
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| Protein GI | 255534064 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.101852 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGTTA AGCATTTTTT TATAGCGACT TTACTTTTAA TAACAACAGT ACTTACTGCA
CAAGGCCAAA CAAAAACATA CTTACAAACA CTGCAGGAAC CCAACCACTG GGTAGATTCT
GTATTTAAAA AACTGAGCAA ACGACAAAAA ATTGCCCAGC TTTTTTTTGT CAGGGCGCAT
ACCAATTTTG GGAAAGCTTT TGAAGATTCT ATAGGTAAAG TAATTAAAAA AGAACGCGTT
GGTGGTCTGG TATTTTTCCA GGGTGGTCCG GGCAGGCAAG CCATTTTAAC CAATACCTAT
CAGTCACTGG CCAGGGTACC TTTATTGATT ACTTCTGATG GGGAGTGGGG ATTGGGCATG
CGTTTAGACA GTACCATTTC TTATCCTTAC CAGATGGCGT TAGGAGCAGT ACAGAATAAA
GACCTGCTGT ATAAAATGGG CCTTGAAGTT GCCAGAGATT ATAAAAGAAT TGGTATGCAC
ATGAACTTGG CACCTGATGT AGACGTAAAT AATAACCCTA AAAATCCAGT GATCAATTTC
CGTTCTTTTG GCGAAAACAA ATACAATGTA GCTACAAAAG CGGCTGCGTA TATGAAGGGC
ATGCAGGATG GCGGCCTATT GGTGAGTATT AAACATTTTC CAGGACATGG AGATACGGAT
GTAGATTCGC ACTACGACCT GCCCCAGCTA AATTTTACCC GGGCACGTCT GGATAGCCTG
GAGATCTATC CCTTCAGAGA ACTGATCCGG GAAGGTGCTG CAGGTGTAAT GATTGCACAC
ATGAACATTC CGGCATTGGA CAATACCCCA AATATGCCTT CTACTTTATC TAAACCAATT
GTAACCGGAT TGCTTAAAGA AGAACTTGGG TTTAAAGGAA TTGTGATCTC GGATGCGATG
GGTATGAAAG GGGTGGTAAA AAATTTTAAA GATGGCGAAG CTGATGTAAT GGGCATTATT
GCCGGCAACG ATATTTTAGA GTTGTCTGAA AACAGTGCAA GAGCCATAAA ACTGGTACGT
AAGGCCGTAA GAGCAGACAG GATCAGTATG GAACAGATCG ACGCAAGTGT AAAAAAAATC
CTTACAGCTA AATATTGGGC AGGTTTAAAT GTTAAACAGA AAGTTGATGA AAATAATGTC
GTAGCCGGGG TGAACAGACC AGAAAGCCTG GCATTGCTGC AACAGCTGGC CGATGCTTCT
ATGACAGTTT TAACGGGTAA AGACAATATC AAACAGCTAA GTGCAGAGAA AAGGACAGTT
ATCATTAGCG TCGGTACACC AGAGGTTACC ACCTTTCAGC GCGAACTGGG TACTTATTAT
AAAAATTCGG TTTTTTATAC GCTGGATAAA AATGCATCAG CCAGCCAGAT TGCAAAGGTG
CTGCGCGAGC TGAAAGCGTT TGACCAGCTG ATAATAGGTA TCCATGATAC GCGTTTACGT
CCGGGTAATG GCATGGTGTT GAGCGCCGAC CTGAAAATAT TTATTAAGGA TATGGCCTTG
AGCAACACTG TATTTGCTTT ATTTGCCAAT CCCTATAATT TGGCCGCCTT ACCTGGTTTA
GAGCAAAGCA AGGGCCTTAT AGTTGCCTAT CAGAAAGAAG ACTTTATGCA GAAGGCTGCA
GCTTCAGTAA TTAAAAATCA GCTGGATGCT ACCGGAAAAC TGCCGGTTAC AGTAAACTCC
TTTTTTAAAT ACGGCGACGG ATTGTAA
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| Protein sequence | MNVKHFFIAT LLLITTVLTA QGQTKTYLQT LQEPNHWVDS VFKKLSKRQK IAQLFFVRAH
TNFGKAFEDS IGKVIKKERV GGLVFFQGGP GRQAILTNTY QSLARVPLLI TSDGEWGLGM
RLDSTISYPY QMALGAVQNK DLLYKMGLEV ARDYKRIGMH MNLAPDVDVN NNPKNPVINF
RSFGENKYNV ATKAAAYMKG MQDGGLLVSI KHFPGHGDTD VDSHYDLPQL NFTRARLDSL
EIYPFRELIR EGAAGVMIAH MNIPALDNTP NMPSTLSKPI VTGLLKEELG FKGIVISDAM
GMKGVVKNFK DGEADVMGII AGNDILELSE NSARAIKLVR KAVRADRISM EQIDASVKKI
LTAKYWAGLN VKQKVDENNV VAGVNRPESL ALLQQLADAS MTVLTGKDNI KQLSAEKRTV
IISVGTPEVT TFQRELGTYY KNSVFYTLDK NASASQIAKV LRELKAFDQL IIGIHDTRLR
PGNGMVLSAD LKIFIKDMAL SNTVFALFAN PYNLAALPGL EQSKGLIVAY QKEDFMQKAA
ASVIKNQLDA TGKLPVTVNS FFKYGDGL
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