| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4181 |
|---|
| Symbol | |
|---|
| ID | 8255316 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 5060637 |
|---|
| End bp | 5061416 |
|---|
| Gene Length | 780 bp |
|---|
| Protein Length | 259 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644937846 |
|---|
| Product | UBA/THIF-type NAD/FAD binding protein |
|---|
| Protein accession | YP_003094434 |
|---|
| Protein GI | 255534062 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1179] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.0515522 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGATT TAAACTGGTT GTCGCGCTCA GCTTTGCTGG TCGGAAATGA AGGAATTGAT
ATTTTGCAGC AAAAGCACGT GCTGGTAGTG GGCCTTGGTG GGGTAGGCTC TTTTGCTGCA
GAGTTTATGT GCCGGTCGGG TATAGGTGAG CTTACGATTG TTGATGGAGA TGTGGTTGAT
CCGAGCAACA GAAACAGGCA ATTGCCTGCC CTGTCTACGA ACCATGGGCT AAGCAAGGCT
GATATCATGA AAGAACGTTT ACTGGCCATC AATCCGGATC TGAAACTGCA TGTCGTAAGA
GATTTTTTAA CCCCTGAAAA ATGCCGGGTG CTGATGGATC AGCACTTTGA TTACCTGATG
GATTGCATAG ATAGCATTAC CCCAAAAGTT ACCCTGCTGT CCAAAGCACT GGAAAAAGAT
ATGCCCATTG TAAGTTCGAT GGGTGCGGGT GGAAAACTAG ACCCTACCCA GCTAAGGGTA
ACCTGGCTGC CAGATACCTA TCAATGTGTT TTTGCCCAGT ATGTACGGAA AAGACTGAAA
AAACTGGTCA ATTATGATAA GGTGAAAGCT GTCTTTTCTA CCGAGGCCGT TGCCAAAAGT
TCGCTGGTGA TGACAGATGG CAGCAATTTC AAGCGTTCTG CGTATGGTAC CATATCTTAC
CTGCCCGCTG CTTTTGGTGG GGTTTGTGCT TCAGTTGCGA TCAGGGATTT GTTGAAACAG
CCCATAACCA TGGCAGAACG GCCACCAAGA ATTGCTTCAA AAAAGAAGAA GAAGGTTTGA
|
|---|
| Protein sequence | MSDLNWLSRS ALLVGNEGID ILQQKHVLVV GLGGVGSFAA EFMCRSGIGE LTIVDGDVVD
PSNRNRQLPA LSTNHGLSKA DIMKERLLAI NPDLKLHVVR DFLTPEKCRV LMDQHFDYLM
DCIDSITPKV TLLSKALEKD MPIVSSMGAG GKLDPTQLRV TWLPDTYQCV FAQYVRKRLK
KLVNYDKVKA VFSTEAVAKS SLVMTDGSNF KRSAYGTISY LPAAFGGVCA SVAIRDLLKQ
PITMAERPPR IASKKKKKV
|
|---|
| |