| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4165 |
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| Symbol | |
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| ID | 8255300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5038857 |
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| End bp | 5039507 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937830 |
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| Product | TonB family protein |
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| Protein accession | YP_003094418 |
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| Protein GI | 255534046 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000230804 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00000000895205 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGACAAAGA TCCTGATTGC ATTTTTTGTA CTGTTGGTAC CTGCAGTAAG TGCCCAGCCG
GTTATAAAGG GTGGGCTGGA AGCCTTTGTT ACGGCAAATA ACATTTATCC CCAGTATTCT
TTGCAAAATT GCATTCAGGG TACTGTCACG ATCAGCTTTA AGCTCAGCAA GAGTGGTCAT
GTCTATTATT CAAAAATTAG TTCGGGCATC GGTACAGACC TGGATGATGA GGCCTTAAGG
CTGATCAGGC TGAGTAGTGG CAAATGGACT GTACCTGAAA ACCATGATAC AACTGTGTTT
TTGGTAGCCC CTATGAAATT TACATTATCA GGCTATAACT GTGCCGATAA GGATCCCCAG
GAAATTAAAC GGGCAATTGC AGTTTATAAG TCGAGCGAAG CACTGGCCAA TTCAATTCAG
AACTTTTATA AGAATAAAGA AAAGGGCGAC ATTAAAGCGG GGGAAGAAGC CCGTTTTATT
GCCTTAAAGC GGGAATTGGG TTATGATGAT GCTTATTTTA AGGAGAGAAT AGCAGATGGG
CTTAAAAAGA TACAGCAGCA GGACAAACAG GGAGCCTGCG AAGACTTTCT TTTTGTAAAA
TACATGGGAT CTGACCTGGC GGATGAAATG CTGGAAAAGT ATTGCAGATA A
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| Protein sequence | MTKILIAFFV LLVPAVSAQP VIKGGLEAFV TANNIYPQYS LQNCIQGTVT ISFKLSKSGH
VYYSKISSGI GTDLDDEALR LIRLSSGKWT VPENHDTTVF LVAPMKFTLS GYNCADKDPQ
EIKRAIAVYK SSEALANSIQ NFYKNKEKGD IKAGEEARFI ALKRELGYDD AYFKERIADG
LKKIQQQDKQ GACEDFLFVK YMGSDLADEM LEKYCR
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