Gene Phep_4163 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4163 
Symbol 
ID8255298 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5036944 
End bp5037915 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content41% 
IMG OID644937828 
Producthypothetical protein 
Protein accessionYP_003094416 
Protein GI255534044 
COG category[S] Function unknown 
COG ID[COG4850] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.083757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000516956 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAATAAAT CTGTCAGCGT TAAAGTATAT CATGGTTACG GGCACACGCA CAATCTGGTT 
GTATACGGAC ATGTATTCCG TTTTAAAGCC CGAACGAGAC AGATTTATAG CAATAATCTT
TTTGTTAACA TTGTTCACCT GCTAAAACTA TTTATTTTAA AGCCTTATCC TTACGTTAAA
GTTAGGTTAA CTTTTAAAGG GCAGCAGGTA TACAACACAA CCGAATATGA TGGGTTCTTT
AAATTTGAAT GGGCGGCTAT TGAAAATGTT CAGGCAGGCT GGCATAGTGT TAAAGTTGAG
GCATTGAATG ATCATGGTGT TGTGATGGCA GTAGGACACG GACAGATATT TGTACCTCAT
ATTACCCAAT ATGCTTTCAT TTCAGATATT GACGATACGG TAATGGTTTC CCATTCGGCA
GCCATTGGAA GAAGGCTAAG AGAGCTGTTT ATCAAAAATC CGAGGACGAG AAAAACTTTC
CAGGATACTT ACACGCTCTA TAAATCGCTG TCACTGTCAC ATACCAGCGC TGATCAGCCA
AATCCTTTTT TTTATGTTTC CAGTAGTGAA TGGAACCTGT ACGATTACCT GGTAGAAACC
TTCAGGTACA ACAAGTTACC TGAAGGTGCA TTTTTACTGA ACCAGATCAA GCGTTGGAAA
GACCTGATCA AAACAGGTAA AACAGGCCAT CAGGGTAAAC TAATGCGGGT AATGCGGATT
CTGGATGCTT TTCCCAACCA AAAGTTTGTT TTTCTTGGCG ACAATACCCA AAGCGATCCT
GCTATTTATA CAGCTATAGC AGAAAAGTAT CCTAAAAATA TTGAAGCCGT CTACATCAGG
AATATCCGTA AAGAAAAGGA AGCCCTTACC TGTGAGTTCC TGAAAAAAAT TGAGGCCCGG
AACATCAGGA CCTGCCTTTT TGAAACGAAT GAGGAGGCCA TAACGGATGC CCTCAGTGCG
GGACTGATCT AA
 
Protein sequence
MNKSVSVKVY HGYGHTHNLV VYGHVFRFKA RTRQIYSNNL FVNIVHLLKL FILKPYPYVK 
VRLTFKGQQV YNTTEYDGFF KFEWAAIENV QAGWHSVKVE ALNDHGVVMA VGHGQIFVPH
ITQYAFISDI DDTVMVSHSA AIGRRLRELF IKNPRTRKTF QDTYTLYKSL SLSHTSADQP
NPFFYVSSSE WNLYDYLVET FRYNKLPEGA FLLNQIKRWK DLIKTGKTGH QGKLMRVMRI
LDAFPNQKFV FLGDNTQSDP AIYTAIAEKY PKNIEAVYIR NIRKEKEALT CEFLKKIEAR
NIRTCLFETN EEAITDALSA GLI