Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4163 |
Symbol | |
ID | 8255298 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 5036944 |
End bp | 5037915 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 644937828 |
Product | hypothetical protein |
Protein accession | YP_003094416 |
Protein GI | 255534044 |
COG category | [S] Function unknown |
COG ID | [COG4850] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.083757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000000516956 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAATAAAT CTGTCAGCGT TAAAGTATAT CATGGTTACG GGCACACGCA CAATCTGGTT GTATACGGAC ATGTATTCCG TTTTAAAGCC CGAACGAGAC AGATTTATAG CAATAATCTT TTTGTTAACA TTGTTCACCT GCTAAAACTA TTTATTTTAA AGCCTTATCC TTACGTTAAA GTTAGGTTAA CTTTTAAAGG GCAGCAGGTA TACAACACAA CCGAATATGA TGGGTTCTTT AAATTTGAAT GGGCGGCTAT TGAAAATGTT CAGGCAGGCT GGCATAGTGT TAAAGTTGAG GCATTGAATG ATCATGGTGT TGTGATGGCA GTAGGACACG GACAGATATT TGTACCTCAT ATTACCCAAT ATGCTTTCAT TTCAGATATT GACGATACGG TAATGGTTTC CCATTCGGCA GCCATTGGAA GAAGGCTAAG AGAGCTGTTT ATCAAAAATC CGAGGACGAG AAAAACTTTC CAGGATACTT ACACGCTCTA TAAATCGCTG TCACTGTCAC ATACCAGCGC TGATCAGCCA AATCCTTTTT TTTATGTTTC CAGTAGTGAA TGGAACCTGT ACGATTACCT GGTAGAAACC TTCAGGTACA ACAAGTTACC TGAAGGTGCA TTTTTACTGA ACCAGATCAA GCGTTGGAAA GACCTGATCA AAACAGGTAA AACAGGCCAT CAGGGTAAAC TAATGCGGGT AATGCGGATT CTGGATGCTT TTCCCAACCA AAAGTTTGTT TTTCTTGGCG ACAATACCCA AAGCGATCCT GCTATTTATA CAGCTATAGC AGAAAAGTAT CCTAAAAATA TTGAAGCCGT CTACATCAGG AATATCCGTA AAGAAAAGGA AGCCCTTACC TGTGAGTTCC TGAAAAAAAT TGAGGCCCGG AACATCAGGA CCTGCCTTTT TGAAACGAAT GAGGAGGCCA TAACGGATGC CCTCAGTGCG GGACTGATCT AA
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Protein sequence | MNKSVSVKVY HGYGHTHNLV VYGHVFRFKA RTRQIYSNNL FVNIVHLLKL FILKPYPYVK VRLTFKGQQV YNTTEYDGFF KFEWAAIENV QAGWHSVKVE ALNDHGVVMA VGHGQIFVPH ITQYAFISDI DDTVMVSHSA AIGRRLRELF IKNPRTRKTF QDTYTLYKSL SLSHTSADQP NPFFYVSSSE WNLYDYLVET FRYNKLPEGA FLLNQIKRWK DLIKTGKTGH QGKLMRVMRI LDAFPNQKFV FLGDNTQSDP AIYTAIAEKY PKNIEAVYIR NIRKEKEALT CEFLKKIEAR NIRTCLFETN EEAITDALSA GLI
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