| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4159 |
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| Symbol | |
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| ID | 8255294 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 5030693 |
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| End bp | 5032096 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644937824 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_003094412 |
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| Protein GI | 255534040 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00004642 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAAGAGG AATTTTACTT TGATTTTAGT GATGACGCCC AACGGTCTGT TGAGCGTTAC
GAGGAGATGA TACGCAATCA GGATCAGTAC TTTTTTGATG CCCAGGCTTT TGAGAATATT
ATTGATTACT ATATTGAGAA GAGTGACCCT GTAAAGGCCC TTCAGGTAAT AGAATATGCA
CTTAATCAGC ATCCTTATGC TGCGGTATTT CTGGTTAAAC AGGCGCAGTT GCTGTTTATA
ACCGATCAGA CGGAAAGGGC ATTCCTGTCG CTGCAGAAAG CGGAAATGCT GGAGGCTTCT
GAAGCAGAGA TCTATATTTT AAGAGGGAAT ATCTTTAATA GCCTTGAGCG TTATTCTGAA
GCATTGGATA ATTTCCAGAA AGCATTGGAA TTTGCTGAAA CAACAGATGA AATTCTTTTG
CAGATTGCTT ATGTATACCA GAATATGCTG GACTATGAAA GCGCGATTAT ATATATTAAA
CAGAGCCTGG AGCAAAACAT GGAGAACAAG GACGGTTTGT ATGAGCTTGC TTTTTGTTAT
GACATTTTAG ATAAACAGGA AGAAAGTATT AAGTTTTATC AGGAATACAT AGATAATGAT
CCGTATTCTT ATGCCGCATG GTATAACCTG GCCAATTCTT ACCATAAACT GGATTTGTTC
GAGAAAGCAA TTGATGCTTA TGATTATGCC ATCTTAATTA AAGACAATTT TGCTTCTGCC
TACTACAATA AAGGGAATGC ACTGGTTCAG CTTGACCGCT ACACGGAAGC TATTGAGGTT
TATAAACAAA CCTTTGAATA CGAACCACCC AATGCCGATA CCTATTGTGC TATCGGGGAA
TGTTATGAAA AGCTTGAAAG GATGGATGAA GCGCGTTCAT ACTACAAAAA ATCTGTTAAG
ATGGACGCGA AGATGGCCGA TGCCTGGTTT GGCATAGGTG TTACCCTGAA TTTTGAGGAA
CGCTACTTTG AGTCGCTGCA TTTTTACAGA AAAGCGCTGG AACTGGATGC AGAGAATCCG
GATTTTTGGT TTGCCATGGC CGATGCCCAT TATAAGCTCG GGCAGATAGA ACAATCTGTT
GAAGCCTATT ATAAAGTTTT GGAGTACAAT CCGGTAGATG TAGAAGCCTG GCTTGATTTT
TCAACTGTAT TGTACGAGCA GGGAAAACTA CTCGAAGCTT CAGAGACGAT GTCTGATGCG
ATAAAAAATA ATCCTGATGC CGCAGAGCTA TATTATCGTA TGGTAGCTTA TTTATTTGCC
CTTGGAAAAA AGAGCGAAGC CCTCTTATAT CTTGAAACAG CCCTGGTTAC AGATCCTGAA
AAGCACTATA TTTTGTTTGA ATATTTACCT CAATTACAAG ATAACAGCTC AATAGTGGAC
GTTATCAATA GGTATATAAA ATAG
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| Protein sequence | MEEEFYFDFS DDAQRSVERY EEMIRNQDQY FFDAQAFENI IDYYIEKSDP VKALQVIEYA
LNQHPYAAVF LVKQAQLLFI TDQTERAFLS LQKAEMLEAS EAEIYILRGN IFNSLERYSE
ALDNFQKALE FAETTDEILL QIAYVYQNML DYESAIIYIK QSLEQNMENK DGLYELAFCY
DILDKQEESI KFYQEYIDND PYSYAAWYNL ANSYHKLDLF EKAIDAYDYA ILIKDNFASA
YYNKGNALVQ LDRYTEAIEV YKQTFEYEPP NADTYCAIGE CYEKLERMDE ARSYYKKSVK
MDAKMADAWF GIGVTLNFEE RYFESLHFYR KALELDAENP DFWFAMADAH YKLGQIEQSV
EAYYKVLEYN PVDVEAWLDF STVLYEQGKL LEASETMSDA IKNNPDAAEL YYRMVAYLFA
LGKKSEALLY LETALVTDPE KHYILFEYLP QLQDNSSIVD VINRYIK
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