Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4154 |
Symbol | |
ID | 8255289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 5026608 |
End bp | 5027843 |
Gene Length | 1236 bp |
Protein Length | 411 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 644937819 |
Product | protein of unknown function DUF214 |
Protein accession | YP_003094407 |
Protein GI | 255534035 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.00192452 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | TTGAATACAC CTTTCTACAT AGCTCGGCGG TATCTTTTTG CAAAAAAATC TACCAATGCC ATCAACATTA TCTCTACCAT TTCGGTAGCA GGGGTTTTTG TAGGTAGTGC AGCGCTGATC ATTATCCTGT CGGTATTCAA TGGTTTTGAA GAGGTGGTGT TAAAAATGTT TAATACCATT ACCCCGCAAA TAGTGATCTC TCCTTTAAAA GGGAAAACAT TTAATCCCAA TACGACTTAT TTTAATGAAT TGCGAAAGGA TAAGGAAATC TATTCTTTTA CTGAAGTGCT TTCGGAAAAT GCTTTATTAA GGTATAATGA TAAACAGTCT GTTGGGCTGG TAAAAGGGGT AAGTACAGAT TACCTGAAAA ACAAGAGCCT GGACAGCATT ACCATTGACG GTAATTTTGT GCTCGAAAGC AAGAGCCTGA ACTACGCGGT AATTGGTTCG GCCATTCAAA ATTTTTTGAT GGTAAATACA ACAGATCCTT TTTATCCGCT GCAGATTTTT TCACCTAAAA AGAAGGCGAA CCAGGCCAGT TCAATCAATC CGGCAGATGA TTTTACGATT CTTTCTATTC CGGTATCCGG AGTTTTTGAA GTGCAGCAGG ATTTCGATAA TATGGCTATA GTCCCATTGA GGTTTGCCAG AAAACTGCTT GAAGAACCGC TAAACATTTC AGCCATCGAG ATCAATCTGC ATAAAGGTGC GGATGCCGAT CTGTTCAGGC AAAAGATAGA AGATCAGATC GGGGAAAACT TTGAAATAAA GGATAGGATA CAACAGAATA AAGTTTTATA TAATATTCTG GGCAGTGAAA AATGGGCCGT ATACATCATT CTCACCTTTA TATTGATCAT TGCCATATTC AATATCATTG GTTCATTAAC CATGCTGGTA ATTGATAAGT TGAAAGACAT TGCCATATTG AGCAGTTTGG GGGCTGGTAA AAAGTTAATT AAACGTATCT TTTTGCTGGA AGGGATGATG ATTTCCATGA CCGGTTGTAT ATGTGGTCTG CTTATCGGAC TTGGCTTCTC TTTGCTTCAA CAGAAGTTCG GACTCATAAA AATGTCCCAG GATAATCTCG TGATTACGAA TGCTTATCCT GTGGCCTTAA AATGGAAAGA TTTTCTGCTC GTATTCTTTA CCGTGAGTAT TTTTTCTTTT ATGGCATCAG CTTTGTCATC TAATTTGAGT GTAAAGAAGA TAAACCATTT AAATCAAGAT CTATAA
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Protein sequence | MNTPFYIARR YLFAKKSTNA INIISTISVA GVFVGSAALI IILSVFNGFE EVVLKMFNTI TPQIVISPLK GKTFNPNTTY FNELRKDKEI YSFTEVLSEN ALLRYNDKQS VGLVKGVSTD YLKNKSLDSI TIDGNFVLES KSLNYAVIGS AIQNFLMVNT TDPFYPLQIF SPKKKANQAS SINPADDFTI LSIPVSGVFE VQQDFDNMAI VPLRFARKLL EEPLNISAIE INLHKGADAD LFRQKIEDQI GENFEIKDRI QQNKVLYNIL GSEKWAVYII LTFILIIAIF NIIGSLTMLV IDKLKDIAIL SSLGAGKKLI KRIFLLEGMM ISMTGCICGL LIGLGFSLLQ QKFGLIKMSQ DNLVITNAYP VALKWKDFLL VFFTVSIFSF MASALSSNLS VKKINHLNQD L
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