Gene Phep_4141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4141 
SymbolanmK 
ID8255276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp5008770 
End bp5009969 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content44% 
IMG OID644937806 
Productanhydro-N-acetylmuramic acid kinase 
Protein accessionYP_003094394 
Protein GI255534022 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2377] Predicted molecular chaperone distantly related to HSP70-fold metalloproteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.141283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.603971 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAA CCTGGGAAAA GTTTTTTCAA ATTATTCAGC AGCCGGAACG GTTAATCATA 
GGCCTCATGT CGGGTACTTC AATGGACGGC TTAGATATTG CTTTATGTGC AGTGAGAGGT
AGCGGAACGG CAACCCAGGT AAGACTGGTA GAATTTAAAA CAGTTTCCTA TAGTAATGAA
TTTAAGGCGG AGGTAAAATC TATTTTTTCA AAAAGGGATG CTGATCTGCA AATGGTATGC
CTGATGAACG AGAAAGTAGG TTTGCTGCAT GCTGAATTGA TTCTTGAGGC CATTGCTTCC
TGGGGTTTAA AGCCATCAGA TATTGATGTA ATAGCGAGCC ATGGGCAGAC GATTTTTCAT
GCGCCGAAAT CTTTGCATAG ACTGGATGAT TTTCCGAATG CAACTTTGCA AATAGGGGAC
GGCGATCATA TTGCGGTTAA AACAGGTATC ATTACCATTG CCGATTTCAG GCAAAAACAT
ATCGCCGCTG GCGGAGAGGG GGCACCTTTG GCTGTTTATG GGGATTACCT GCTTTTTTCT
AAAAAAGGAG AAGACCGCAT TATGCTTAAT ATAGGTGGCA TTGCCAATTT TACCTATTTG
CCGGGCGACA ATGATGCGGC TAAGGTTTTT TCGACTGACG TAGGGCCCGG AAATACATTG
ATGGACCAGT TTGTACAGCA ACATTATAAA GGCTTGTATT ATGATGGGGA TGCCCGGATT
GCGCGTGCTG GAATGGTAAA CGAACAGCTT TTAGCAGAGC TGATGCAATC CGAATTTCTG
CACGCAGCCT TTCCTAAAAC GACAGGTCCG GAACTTTTTA ACCTCGAATA TCTGGCGCAG
GCACAGGCCA GGTCTAAAAC AGAGCATATC AGTAAAGAAG ATATCATGGC TACGCTCTGC
AGGTTTTCCG CTGATGTGAT CATCAATGCC ATTGAAAAAT GTTTCGGAAA AGCAGAAACA
CCTTCAATCT TTATCAGTGG CGGAGGTATG CATAACCCAT TGTTGTTGAA ACAGCTTAAA
ACAGCGCTTA ACAATGCCAG TTTCTTTTCA ACAGATGCAC TGGAAATAAA TCCCGATGCC
AAGGAAGCCG TACTTTTTGC CGTCCTGGCA AATGAAACCA TGGTTGGCGG TAAAACCAAT
TTTGGGGATA GGGAAGGCGT GCCTTCAGTA TTTATGGGAA AAGTTTGTTT GCCAGAATAG
 
Protein sequence
MNATWEKFFQ IIQQPERLII GLMSGTSMDG LDIALCAVRG SGTATQVRLV EFKTVSYSNE 
FKAEVKSIFS KRDADLQMVC LMNEKVGLLH AELILEAIAS WGLKPSDIDV IASHGQTIFH
APKSLHRLDD FPNATLQIGD GDHIAVKTGI ITIADFRQKH IAAGGEGAPL AVYGDYLLFS
KKGEDRIMLN IGGIANFTYL PGDNDAAKVF STDVGPGNTL MDQFVQQHYK GLYYDGDARI
ARAGMVNEQL LAELMQSEFL HAAFPKTTGP ELFNLEYLAQ AQARSKTEHI SKEDIMATLC
RFSADVIINA IEKCFGKAET PSIFISGGGM HNPLLLKQLK TALNNASFFS TDALEINPDA
KEAVLFAVLA NETMVGGKTN FGDREGVPSV FMGKVCLPE