| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4132 |
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| Symbol | |
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| ID | 8255267 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 4996365 |
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| End bp | 4997111 |
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| Gene Length | 747 bp |
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| Protein Length | 248 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937797 |
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| Product | regulatory protein DeoR |
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| Protein accession | YP_003094385 |
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| Protein GI | 255534013 |
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| COG category | [G] Carbohydrate transport and metabolism
[K] Transcription |
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| COG ID | [COG1349] Transcriptional regulators of sugar metabolism |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.391954 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.380185 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCAAAA AAGAAAGGCA CGACTTTGTA ATGCGCCAGA TCAACTTACA CAACCGTGTG
CTTACATCTG ACCTTGTTCA ATTGCTCAAT GTCTCTGAAG ATACCATCCG GCGTGACCTT
CAGGAATTGG CAGACAAAGG CCAGCTTTCT AAGGTACATG GTGGTGCGCT CTCAAAATCT
TATCAATCTT CTTTTGACGA TAGTGAAGTT TATGCCAAGG ATGCCAAAAT CCTCATCGCG
AAGAAAACCA TTCCCTTAAT AAAAGACGGA ATGGTCATTT TAACAGGGGG AGGAACCTCT
ATTATAGAGC TGGTAAAACA ACTCCCCGAA AATTTAAATG CAACCTTCTT TACCATCAGC
CCCTTTGTAG CCATAGAACT GGCAAAATAT CCCCGAGTAG AGGTGATCCT TATAGGTGGT
TTATTTTCGA AAAACTCGCA GATAACTTAT GGAGGGCATG TTATCAACCA GCTTTCAGAG
ATCAATGCCG ACCTTTGCCT GCTGGGTACC AGTGCCATAC ACCCGTTGGA CGGACTAACA
GATACCGATT GGGAAATTAA CCAACTGAAA AAAGCCATGT TCAGCTCTTC AAAAAGAGCC
GCTATTCTGT GCATTTCGGA AAAACTGGAT ACTTCGTTAA GGTTAAAAGT GGCTTCCCTG
GATAATATAG ATTACCTGGT TACAGAGCTG GATCCAGGAG CCGAAGAACT TAATGCTTAT
AGGGTAAAAA CGCTACAGAT ACTTTAG
|
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| Protein sequence | MLKKERHDFV MRQINLHNRV LTSDLVQLLN VSEDTIRRDL QELADKGQLS KVHGGALSKS
YQSSFDDSEV YAKDAKILIA KKTIPLIKDG MVILTGGGTS IIELVKQLPE NLNATFFTIS
PFVAIELAKY PRVEVILIGG LFSKNSQITY GGHVINQLSE INADLCLLGT SAIHPLDGLT
DTDWEINQLK KAMFSSSKRA AILCISEKLD TSLRLKVASL DNIDYLVTEL DPGAEELNAY
RVKTLQIL
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