Gene Phep_4123 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4123 
Symbol 
ID8255258 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4980145 
End bp4981590 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content40% 
IMG OID644937788 
Productprotein of unknown function DUF187 
Protein accessionYP_003094376 
Protein GI255534004 
COG category[S] Function unknown 
COG ID[COG1649] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.543211 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA ACCATTTACA CCTTGTGGCA GTGCTGATCT TGGCACTGCT TCTAAATGCC 
TGTAAGAAAG GTGGTAACGA CGCCAAACCT GATCCTGTTG ATCCGCCAGT AGAAACAAGC
CTTCTTTTTC CTAAAAAAGA AATGAGAGCG GTTTGGATTG CCTCAGTGTA TGGTTTAGAC
TGGCCACAAA GTGTATATAC TATGGCTGGC CAGAAGCAAC AATACATAGA TTACCTTGAA
AAGTTTAAGA GCCTTAATAT CAATGCCATA TATTTTCAGG TAAAAGGAAT GGGAGATGCA
TTTTATAATT CCAGCTATGA ACCCTGGAGC GCATCTATCA CTGGAACAAG AGGTGTAGAC
CCAGGGTATG ATGTGCTTAA ATTTATGATT GATGAAGCCC ATGCCAGAGA TATTGAGTTT
CATGCCTGGA TGAACCCATA TCGGATAGCA ACTCGTGCCA GTTCTGCCAG CTCATTTCCG
GCCCTTCATT CTTCTGTTAA ACCAGAATGG GTACTGGACT TTCCGACCAT ACGCATTTAT
AACCCTGCAT TGCCCGAAGT GAGGCAACGA CTGGTTGATA TTGTTAAAGA AACGATCACA
AAATACGATG TCGATGGGAT ACATTTTGAT GATTACTTTT ATCCGGAAGG CGAAACGTTT
ACAGATCAGG CAGATTTTAC AAAGTACGGT GCAGGTATGG CCAATATTCA GGATTTTAGA
AGGGACAATG TGAATAAGGC AATAAAAGGT GTATATGATA TTATAGTAGC TACGAAACCC
GGAGTAGTAT TTTCTGTTTC ACCTGCTCCG GAAATCACTA AAAACTTTAA TACCCTATAT
GCCGACGTTA AAAAATGGAA CCAGGAAGGT TGGGTAGATG TGGTTATACC TCAATTGTAT
CAGGAAATAG GAAACCAATA CAACGATTTT CAATTGCGAC TTTCCGAATG GTCTCAGAAC
AGCTTCAAAG CAGCTTTAAT GGTGGGGCAT GGCTATTATA GATTTGGAGA TGCTACTGCG
CCGGCGGCTT TTCAGTCATC ATCAGAGTTA CAAAGACAAT TTGACCTGAC TAGGTTAAAT
AAGAAAGTTG TAGGAAATGC AATGTACAGT GCTAAATATC TTAACTTGAA TAAGGTAGGC
ATTACAGATA AGCTCGCCGC TATTTACAAA GACCCTGCTG TTATGCCATT TTTAGGTCGT
AATGTTGCTG CAGCCCCAGC TGAAGCTACA AATGTTAGGA TAGAAAATGG GGAGTTGAAA
TGGAATGTTA CAGGAAATGT GAAATCAGTT GTGTATTATT TTTCTGATTT AAAGAAAGAA
GGGAAAGTAT TAACGATAAC CAAAGGGAAT AGCATTTCAA TTAACACAAT TGGATATTAT
TCTGTTTCAA CGCTAAATAT AGATAGCCAG GAAAGTAAGT CATCTGGTGT AGTAGAGAAA
AAATAA
 
Protein sequence
MKKNHLHLVA VLILALLLNA CKKGGNDAKP DPVDPPVETS LLFPKKEMRA VWIASVYGLD 
WPQSVYTMAG QKQQYIDYLE KFKSLNINAI YFQVKGMGDA FYNSSYEPWS ASITGTRGVD
PGYDVLKFMI DEAHARDIEF HAWMNPYRIA TRASSASSFP ALHSSVKPEW VLDFPTIRIY
NPALPEVRQR LVDIVKETIT KYDVDGIHFD DYFYPEGETF TDQADFTKYG AGMANIQDFR
RDNVNKAIKG VYDIIVATKP GVVFSVSPAP EITKNFNTLY ADVKKWNQEG WVDVVIPQLY
QEIGNQYNDF QLRLSEWSQN SFKAALMVGH GYYRFGDATA PAAFQSSSEL QRQFDLTRLN
KKVVGNAMYS AKYLNLNKVG ITDKLAAIYK DPAVMPFLGR NVAAAPAEAT NVRIENGELK
WNVTGNVKSV VYYFSDLKKE GKVLTITKGN SISINTIGYY SVSTLNIDSQ ESKSSGVVEK
K