| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4121 |
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| Symbol | |
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| ID | 8255256 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4978018 |
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| End bp | 4979718 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937786 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_003094374 |
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| Protein GI | 255534002 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.132003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAT ACAAAATTGC CGCAGTTGCT CTCCTTATTA CCTTTGCTTC TATAACCTGG
TCTTTTAAGG AAGACCTTTT TCAGGTGTCA AAGAATCTGG ACATTTTTGC TTCTTTATAT
AAAGAAATAA ACATCAATTA TGTAGAGGAA ACAAACCCTT CCAGCCTCAT GCGCAGCAGC
ATTGATGCGA TGCTCGAAAA TCTGGACCCT TATACAGAAT ACGTTCCTGA ATCAGAAGTA
GAAGATTATA AGCTGAAATA CGTGAGTACT CAATACGGTG GCATTGGGGC CAGCACCATT
TTTATTGAGG GTAAGTTATT TGTAAATGAG GTTAATGAAG GCTATCCGGC CGATAAACAG
GGAGTAAAAC CTGGCGATCA ACTTGTAAAA ATTAATGGTA ATGAGGTTAA GGGGAAAGAC
CGGGCGCAGG TAAGCCAGTT GCTGAGGGGA CCAAAAGGCT CTGTTGTCGA ACTCCTGATC
ATTAGGGAAG GTACCTTGAT TACCAAAAAC CTGACCCGTG ATGAAATCAA ACAGCCCAAT
GTTGCCTACT CCGGCATGAC AGCAGATAAT ATTGCCTATA TCCGTTTGGA TAAATTCCTT
GAAAACTCTG CTCAGGAGGT TAAGGATGCT GCAGTTACAT TGGGTAGACA GCAGCCTAAG
GGTATGATCC TCGATTTGCG ATACAACGGT GGGGGGATAC TGCAGGAAGC TGTTAAAATT
GTCAACATTT TTGTGGATAA GGATATCCTG ATCGTGACCC AGAAAGGAAG AAATCCGCAA
AAAACCATTA CCTATAAAAC AATTAACCAG CCCTTATTTC CAAACGTTCC ACTGGTGGTG
TTAATCAGTG GATCTTCTGC CTCGGCTTCT GAAATTGTTG CTGGAGCACT GCAGGACCTC
GACAGGGCTA TAATTGTTGG ACAGAGGAGC TATGGAAAGG GGCTGGTTCA ACAAACCTTT
AACCTGCCTT ATAACAGCCT TGTTAAGGTT ACTGTAGCCA AATATTTTAC CCCCTCGGGC
AGGTGCATCC AGGCGCTTGA CTATGCGCAT AAGGATGCCA ACGGCAAAAC ACTCAAATTT
GCAGATTCGC TGATGAGTAA ATTCAGTACA AAAACCGGGA GAAATGTATA TGACGGAAAT
GGCATTTATC CTGATGTGCT GGTAAATAGC CCTAAGCTTA GCCCGGTAAC CATTTCACTG
TTGAATAAGA ACCTGTTTTT TGATTATGCC AATAATTATA AAAAGAACAA TAAAGAAATT
GCTCCGGCAG CTTCTTTTCA GCTTACGGAA AACGATTATG CCGCTTTTGT AAATACCATG
GCAGGACGGG ATTACTCATA CACCTCACGT ACAGAACGCT TATTGTCTGA CCTGAGAACA
GAGGCAGAAA AAGAGAATAA ACTGACGCTT GTTAAGGCCG ACCTTGAAGA TTTAAAAGAA
AAAATGCTTG GTGCCAGAAA AACAGACCTG ACTACCTATA AAGCAGAGAT CAAAAGAGTT
TTAGAAACCC AGATCGTAAG CCGCTACTAC TATGAAAAGG GTAAAGTGAT CCAGGCGTTT
CAGTACGATA AGGAGCTGAA TGCAGCAAAA AGTCTGTTAA ATAACAACAA TAAAATGCTG
GCCATCCTTA AAGGTGAGGG CGAATATAAA ACAATAGGCA GCCCTATAAA AACAATAGCA
GCTGCCTCTG ATAATAATTA A
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| Protein sequence | MKIYKIAAVA LLITFASITW SFKEDLFQVS KNLDIFASLY KEININYVEE TNPSSLMRSS
IDAMLENLDP YTEYVPESEV EDYKLKYVST QYGGIGASTI FIEGKLFVNE VNEGYPADKQ
GVKPGDQLVK INGNEVKGKD RAQVSQLLRG PKGSVVELLI IREGTLITKN LTRDEIKQPN
VAYSGMTADN IAYIRLDKFL ENSAQEVKDA AVTLGRQQPK GMILDLRYNG GGILQEAVKI
VNIFVDKDIL IVTQKGRNPQ KTITYKTINQ PLFPNVPLVV LISGSSASAS EIVAGALQDL
DRAIIVGQRS YGKGLVQQTF NLPYNSLVKV TVAKYFTPSG RCIQALDYAH KDANGKTLKF
ADSLMSKFST KTGRNVYDGN GIYPDVLVNS PKLSPVTISL LNKNLFFDYA NNYKKNNKEI
APAASFQLTE NDYAAFVNTM AGRDYSYTSR TERLLSDLRT EAEKENKLTL VKADLEDLKE
KMLGARKTDL TTYKAEIKRV LETQIVSRYY YEKGKVIQAF QYDKELNAAK SLLNNNNKML
AILKGEGEYK TIGSPIKTIA AASDNN
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