Gene Phep_4118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4118 
Symbol 
ID8255253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4975791 
End bp4976537 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content39% 
IMG OID644937783 
Productmetallophosphoesterase 
Protein accessionYP_003094371 
Protein GI255533999 
COG category[S] Function unknown 
COG ID[COG2908] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01854] UDP-2,3-diacylglucosamine hydrolase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA ACATTTATTT CGCTTCAGAT TTTCACCTTG GGTCGCCAGG TTACGCAGAA 
AGCAGACTGC GCGAAGACCG CATATTGAGG TGGCTAAATT TCATAACGCC AACCTGTAGT
GAATTGTTTC TGATGGGTGA TATCTTCGAT TTCTGGTTTG AATACCGTAC CGTTATACCT
AAAGGGTTTG TGCGTTTGCA AGGTAAAATT GCAGAAATGA CAGATGCGGG AATAAAAGTT
TATTTTTTTA AAGGCAACCA CGATATGTGG GTTCACGACT ACTTTAGCAA AGAAATGGGG
ATGGAGATTG TGAGTGATGC ACTGGAGATA GAAAGAAATG GGAAACGGTT CTTTTTACAT
CATGGTGACG GATTGGGGCC TGGTGACAGA AAATACAAAT TATTAAGAAA GATATTCAGA
AACCCGGTTT GTCAGTGGTT ATTTGCCTTA GTGCCACCCC GTATAGGTTT GGGTATAGCC
AACTGGTGGT CTGGCCGCAG CCGGCTTGCC AATAGTAATG AAGAGGTGTT TGAAAGTGTA
GACCAGGAAT GGCTTGCTGT TTATGCTAAA GAAATTTTAT CAAAAACACA TTTCGATTAT
TTTGTTTTTG GACATCGTCA TTTGCCTTTG AACATAGACT TAAATGGTAA AAGCAGGTAT
ATAAACCTTG GTGAGTGGAT CAATTTCAAT TCTTATGCCG TATTTGATGG CAATGATTTA
ACCCTGAATT ACTTTGAAAA AGAATAG
 
Protein sequence
MKKNIYFASD FHLGSPGYAE SRLREDRILR WLNFITPTCS ELFLMGDIFD FWFEYRTVIP 
KGFVRLQGKI AEMTDAGIKV YFFKGNHDMW VHDYFSKEMG MEIVSDALEI ERNGKRFFLH
HGDGLGPGDR KYKLLRKIFR NPVCQWLFAL VPPRIGLGIA NWWSGRSRLA NSNEEVFESV
DQEWLAVYAK EILSKTHFDY FVFGHRHLPL NIDLNGKSRY INLGEWINFN SYAVFDGNDL
TLNYFEKE