| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4104 |
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| Symbol | |
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| ID | 8255238 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4950713 |
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| End bp | 4952929 |
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| Gene Length | 2217 bp |
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| Protein Length | 738 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644937768 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003094357 |
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| Protein GI | 255533985 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.28211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCTAT TTCAATTTAT ACTATTCTTC TTTACAGGTC TGCAGCTTTT AAAAGTACAG
GCCCAGGAAA AAACCGGTTA TATTCCCTTA ACCAAACAAG AAAGGCAAAA AGTAGAACTC
CTGCTGAGTA AAATGACCTT GGAAGAAAAA GCGCATCAGC TGGCCTCATT TTATCCCAAT
GCCAATAAAA GATTAAATAT CCCCCATATG CAGGCCGGTG AATGTCTGCA TGGTGTGGTT
GCTGCCGGCA CCACTTCTTT CCCTCAGGCC ATTTCCATAG CCAGTTCCTG GGATCCTTCG
CTTGTCGAAA GGGTATCTAC CGTGATTGCA AAAGAAGCCA GGGCTTTAGG CATACACCAC
TGTTATACCC CAATGCTTGG GGTTTTGCGC GATGCGCGCT GGGGCCGTTT CGAAGAAGGT
TATGGAGAAG ATGCCTACCT GGTCAGTAAA ATCGGCGTAG CCTTTATCAA TGGCCTGCAG
GGCCGTGGCA AAAACCGCTT CGATAAGGAC CATGTAGTGG CAACAGCTAA ACATTTTGTG
GCCGATAGTG AACCCCTGCT GGGTGCCAAT GGTGCTGCAG TCGAAATTTC CCTGCGTAGT
TTGCACGAAG TTCACCTTCC GCCTTTCCGG GCTGCAGTAG AAGAAGCTCA GGTTGGTTCG
GTCATGCCTG CACATCATAC CTTAAATGGG GTGCCCTGTC ACATCAATAC CTATACCCTA
AACGATGTAT TCAGAAAGGA ATACGGCTTT GATGGTCTGG TGGTTTCTGA TAACAACGAC
CTGAGGTGGG TTCAGGAGCG CTTGTTCGCC ACCGAAAGCC AGGAAGAAAC CATCAGAAAA
GCACTGGAAG CAGGTGTGCA TACCGAGCTT GCCTTTAAAC AGACCTGGGC CGATAAAAGA
ATGTATGGCC CCCCACTGGT CGCCGCGGTA AAAAACGGAA AAGTGCCGGT AAAACTGCTC
GACGACGCCG TTAGAAAAGT ACTGGAATTT AAGATTGCCC TGCACCTCGA CGAAGAAGAA
AATCCATTGG GCAAGGAAAT GACCGAATTA CAAAAAGGTA CAAAAGATGC AGATGTAAAT
GCTGATGTAT TCTTTTCGCA GATCGATGGC TCATTGTCCA GCCCCAGATC AAACTATAAA
ACCGTACTAA ATAATCCTGT ACACGATGCA CTTGCACTCG AAGCAGCCCG CAAAAGTCTC
ATCCTCCTAA AAAACAACAA CCTGCTGCCA TTTAAAAAAA GTCAGTTCAA AAAGATAGCC
GTAATTGGTC CAAATGCCGA TACCATTCGC CTGGGCACTT ATTCTACCCA GCAGCCTAAA
CACTTCATTA CTGTAAAACA AGGCATCGAA ACTGCTGTAG GTAAAAATGC ACAGGTATTG
TATGCGAAAG GGACTGATAT CCAGCATCCA AAAGATACGC AGCTTGCAGA AGCCGTTGCC
ATTGCAAAAG AAGCTGATGT ATGTATCCTG GTGCTGGGCG ATGATGATAA AACCGTAATG
GAAAATGTGG ATAGGGACGA CATTACCTTG CCGGGCGACC AGGATAAGCT GATGCAGGCC
ATTGTAGCCA CAGGCAAACC TGTAGTACTG GTATTGCTGC ATGGCCGTCC GGCCGCTATT
CAATGGGCCA AAGACCATGT TCCGGCCATA TTAGACGGAT GGTTTCTGGG GCAGGAAACA
GGTACTGCCA TTGCAGAAGC CATATTTGGC GATCTGAACC CTTCCGGAAA ATTAACTGTT
ACCTACCCAA GAAATGTAGG TCAGGTACCT GCATTTTATA ATACTTTAAT ACCAGGCAGG
CCAAGAATGA TGTGGGGAAC TACAGAAGGT GCAACCTATC CCTTTGGTTA TGGCATCAGC
TACACACAAT TTAAATATGG AGTACCAAAA CTCTCTAAAG CCAGCATGAA AGCCAGTGAA
ACTGTTTTTG CCGAAATCGA AGTAACCAAT ACCGGTAAAG TGGCTGGCGA TGAAATTGTG
CAGCTGTACC TTCGTGATGA CATCTCTTCA CTGGCAAGGC CAATTAAAGA ATTAAAAGGG
TTTAAACGCA TTAGCCTGCG TCCGGGCGAA ACCCAAAAGA TTTCCCTGCC CATTTCTTCC
CGTTCGCTTG AATTCTGGAA AGATGGCAAA TGGATTACCG AACCTGGCAG TTTCACAGTC
ATGATGGGCC CAAATTCTGA AGAACTGAAA ACCATTAAAT TAGAACTGAC CCAATAA
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| Protein sequence | MRLFQFILFF FTGLQLLKVQ AQEKTGYIPL TKQERQKVEL LLSKMTLEEK AHQLASFYPN
ANKRLNIPHM QAGECLHGVV AAGTTSFPQA ISIASSWDPS LVERVSTVIA KEARALGIHH
CYTPMLGVLR DARWGRFEEG YGEDAYLVSK IGVAFINGLQ GRGKNRFDKD HVVATAKHFV
ADSEPLLGAN GAAVEISLRS LHEVHLPPFR AAVEEAQVGS VMPAHHTLNG VPCHINTYTL
NDVFRKEYGF DGLVVSDNND LRWVQERLFA TESQEETIRK ALEAGVHTEL AFKQTWADKR
MYGPPLVAAV KNGKVPVKLL DDAVRKVLEF KIALHLDEEE NPLGKEMTEL QKGTKDADVN
ADVFFSQIDG SLSSPRSNYK TVLNNPVHDA LALEAARKSL ILLKNNNLLP FKKSQFKKIA
VIGPNADTIR LGTYSTQQPK HFITVKQGIE TAVGKNAQVL YAKGTDIQHP KDTQLAEAVA
IAKEADVCIL VLGDDDKTVM ENVDRDDITL PGDQDKLMQA IVATGKPVVL VLLHGRPAAI
QWAKDHVPAI LDGWFLGQET GTAIAEAIFG DLNPSGKLTV TYPRNVGQVP AFYNTLIPGR
PRMMWGTTEG ATYPFGYGIS YTQFKYGVPK LSKASMKASE TVFAEIEVTN TGKVAGDEIV
QLYLRDDISS LARPIKELKG FKRISLRPGE TQKISLPISS RSLEFWKDGK WITEPGSFTV
MMGPNSEELK TIKLELTQ
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