| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4100 |
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| Symbol | |
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| ID | 8255234 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4942804 |
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| End bp | 4944720 |
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| Gene Length | 1917 bp |
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| Protein Length | 638 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937764 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003094353 |
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| Protein GI | 255533981 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATATG CTATAAAAAG GCAGTGGTGC TTAAAAGTTG CCATCCTTAT TGTTATTTCC
GGATTAAGTT CCTGTAAAAA ATATCTGGAC ATTATCCCTG ATAACGTCGC AACCATAGAC
AATGCATTTG CGATGCGCTC AGAAGCGGAA AAATACCTCT ATACCTGTTA TTCTTACATG
CCAAAGGATG GTAGCCTAGA CCAGGACCCT TCAATTTTAG GTGGCGATGA AATATGGGCA
ATTGACCGTC CGCCAAAACC AAATTTCAAC CATGGAATTT TTGAAATTGC AATGGGGCGT
CAGGCTACGG TTAATCCTGT CGGAGAATTT ATTTGGGTAA ACCTCTATAA AGGCTTGCGC
GACTGTAACA TCTTCCTGGA AAATGTAGAG AGGGTACCCG ACCTTAAGCC AGAAGAAAAA
AGAGAATGGA TTGCTGAGGT CAAATTCCTT AAAGCTTATT ACCATTTTTA TCTGGTACGT
ATGTATGGGC CAATTCCGCT GATCAAAGAG AATTTGCCGG TTGATGTAAA CATCTCCTCT
GTGAAAATTA CCAGAGCACC TGTAGACAGC TGTTTTGCTT ATATCAAGCA ATTGCTCGAT
GAATCAAAAG ATGTATTACA GCCTACCATC AATGATCCGG TTAAAATGCT GGGCCGTATC
ACCAAACCTA TTGTGTATTC TTTAAAGGCT AAAGTTATGG TAACGGCTGC AAGCCCATTG
TTTAATGGAA ATGCCGATCA GGCCAGTTTA AAAAACGCTG ATGGGACACA ACTATTTAAC
CAGCAGGTGG TTCCTGCTAA ATGGGATTCG GCTGTAGTAG CCTGTAAACA GGCAATAGAC
GTATGCGAGG CAGCAGGGTT AAAACTGTAT GAGTTCAATG CGGCTTCATC AACCTTCGTG
TTGTCGGATC AGATGAAATT GCAACTCAGC TTAAGAAATG CTTTCGCAGA AAAATGGAAT
TCTGAAATTA TCTGGGCAAA TACCCAAAGC CTTTCAGCTA ACATCCAGTT AAATGCAACA
CCTAATGTCA ACCCATTATA CCAGGACAAT CCCTTCATTG GATACGAACT GGCCCCGCCG
TTAAAAATCG TAGACATGTT TTACACCGAG AATGGCGTAC CTACAACGGA AGATAGGACC
TGGAACCTGA ACCAGCCAGC TACAAGGGCA GGTACGGTTG AAGATCAGCG GCTCATTAAA
TTAAATTATG AAACCTCCTC TGTCAATTTC GACCGTGAGC CACGTTTTTA TGCCAATCTG
GGCTTTGATG GGGGCATTTG GTACGGACAG GGTTATTTTA ATGATGCAGT ACCTGCAAGT
ACATATTATG TAATGGCCAA AAAGGGGCAG CAAAATGGTA AAGGAAAACC AGATTATGGT
TCGGTAACTG GCTATTTTAT TAAAAAATAC GTGCATTATC AAAATACCCA GGGTAGTGCA
ATGACCGATT ATAGCGTCAA CAATTATCCG TGGCCGTTAA TCCGTTTGTC GCAATTATAT
CTGTTATATG CAGAAGCACT GAATGAGAAA AGCGGACCTG TTGCAGAAGT ACATACTTAT
ATCAATAAAG TACGTGCCCG GGCTGGTCTC AAATCAGTTA AAGAATCCTG GGATCTGTAT
GCAAATAATA CCAAGTACAC GACTCAGGCC GGGATGAAAG ATATTATCCA CAGGGAAACC
TTAATAGAGC TTGCTTTTGA AGGTGCCCGT TTCTGGGATC TTAGAAGATG GAAAGAAGCT
CCTCAGGAGT ATATCAAGCC GATTCAGGGA TGGGACATCG AGCAGTCTAC TGCAAATTTA
TACTACCGCA GAAAACTGGT GTTTACACCC AGATTTTCAA TGAAAGACTA TTTCTGGCCG
ATTCGTGATA ACAATATCCT GAACAATAAG AATTTAATCC AAAATATTGG TTGGTAA
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| Protein sequence | MKYAIKRQWC LKVAILIVIS GLSSCKKYLD IIPDNVATID NAFAMRSEAE KYLYTCYSYM
PKDGSLDQDP SILGGDEIWA IDRPPKPNFN HGIFEIAMGR QATVNPVGEF IWVNLYKGLR
DCNIFLENVE RVPDLKPEEK REWIAEVKFL KAYYHFYLVR MYGPIPLIKE NLPVDVNISS
VKITRAPVDS CFAYIKQLLD ESKDVLQPTI NDPVKMLGRI TKPIVYSLKA KVMVTAASPL
FNGNADQASL KNADGTQLFN QQVVPAKWDS AVVACKQAID VCEAAGLKLY EFNAASSTFV
LSDQMKLQLS LRNAFAEKWN SEIIWANTQS LSANIQLNAT PNVNPLYQDN PFIGYELAPP
LKIVDMFYTE NGVPTTEDRT WNLNQPATRA GTVEDQRLIK LNYETSSVNF DREPRFYANL
GFDGGIWYGQ GYFNDAVPAS TYYVMAKKGQ QNGKGKPDYG SVTGYFIKKY VHYQNTQGSA
MTDYSVNNYP WPLIRLSQLY LLYAEALNEK SGPVAEVHTY INKVRARAGL KSVKESWDLY
ANNTKYTTQA GMKDIIHRET LIELAFEGAR FWDLRRWKEA PQEYIKPIQG WDIEQSTANL
YYRRKLVFTP RFSMKDYFWP IRDNNILNNK NLIQNIGW
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