Gene Phep_4099 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4099 
Symbol 
ID8255233 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4941609 
End bp4942778 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content45% 
IMG OID644937763 
Producthypothetical protein 
Protein accessionYP_003094352 
Protein GI255533980 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGAT TAATATACAT AGTGTTGGCC CTGCTGGCAG TTGTAATTGT CCAAAGCTGT 
AAGGAACAGT CTAGATTAGA CCATATTGAT ACCAGTGAAG CGGCTCCGGG TCAGGTCACC
AATATAAAGG TCGAAAATAC ACCAGGTGGG GCAATGCTGA CTTATAAATT GAATGCAGAT
ATCAGTTTAT CTTATGTAAA GGCAGTTTAT GAAATCCAGC CCGGCGTATT TAAAGAAAGT
AAATCCTCCA TTTATACAGA TACCTTAAGG CTTGAAGGCT TTGGTGATAC CAAAGAACAT
GAAGTAAAAG TTTATAGCAT TGGGAAAAAT GAAAAAATTT CCGAACCTGT AACCGTAAAG
ATTCAGCCGC TTACCCCGCC TGTCGAACTC GCTTATGGTG ATTTAAGTAT AGAACCGGGC
TTTGGGGGTG TAAAAGTGAG GATTAAAAAT ACACTGAAGG CCAACTTGGC CATTGTTATC
GATGCGGATA CTGCAGGTGC CGGTGTATTA CGCCCGCTGC AAACATTCTA CACTGCTGCA
GCCGCCGGAT CCTATTCTAT ACGCGGCCTG AGTTCCAAAC AGATGAAGTT CTCTGTTTAT
CTGAGAGATC GCTGGGGCAA TAAGTCGCTG GCCATTGTCA AAGACCTGAC CCCGCTGTTC
GAACAAAGAG TACCCAAGCC TTTTGGCACT TATATCTTAC CTACAGACCA GGCGGCATTA
TCTTCCGCTT ATGCCTTAAG CTTTATGTGG GATGGGGTGG CAAGCACCAA TATCTATGCT
TCAGGTAACA ATACACCTAT ACCGCAGTGG TTTTCTATTG ATCTGAAAGT ACCGGTGGTA
CTTAGCCGCA TGAAAGAGCA TCAACGGACA GACCCCTATA CTTATACGGG TGCCTGCGTA
AAATCTTTCG AACTGTATGG TTCTAACGCC CCCGCGCTGG ATGGCAGTTG GGCAAGCTGG
ACACTGATCG GTAAATTTGA TTCCTATAAA CCATCCGGGG CCGTAGGGGT AACCAAAGAA
GATATCGCTT ATGGTTATAC GAATGGTGAA GATTTTGAAA TGCCGGATAC CCCTCCTGCG
TATCGTTATC TGCGTTTTAA AACGCTCGAA ACATGGGGTG GAACCGGGCA GGTCACCATT
TCAGAACTTA CTTTCTGGGG TAAATTTTAA
 
Protein sequence
MKRLIYIVLA LLAVVIVQSC KEQSRLDHID TSEAAPGQVT NIKVENTPGG AMLTYKLNAD 
ISLSYVKAVY EIQPGVFKES KSSIYTDTLR LEGFGDTKEH EVKVYSIGKN EKISEPVTVK
IQPLTPPVEL AYGDLSIEPG FGGVKVRIKN TLKANLAIVI DADTAGAGVL RPLQTFYTAA
AAGSYSIRGL SSKQMKFSVY LRDRWGNKSL AIVKDLTPLF EQRVPKPFGT YILPTDQAAL
SSAYALSFMW DGVASTNIYA SGNNTPIPQW FSIDLKVPVV LSRMKEHQRT DPYTYTGACV
KSFELYGSNA PALDGSWASW TLIGKFDSYK PSGAVGVTKE DIAYGYTNGE DFEMPDTPPA
YRYLRFKTLE TWGGTGQVTI SELTFWGKF