Gene Phep_4094 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4094 
Symbol 
ID8255228 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4933488 
End bp4934738 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content46% 
IMG OID644937758 
ProductS-adenosylmethionine synthetase 
Protein accessionYP_003094347 
Protein GI255533975 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0192] S-adenosylmethionine synthetase 
TIGRFAM ID[TIGR01034] S-adenosylmethionine synthetase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.682465 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGTATT TATTTACATC AGAATCTGTT TCCGAAGGTC ATCCGGATAA GATAGCAGAT 
CAGATCTCAG ACGCCCTTAT CGATAACTTC CTGGCTTTTG ATGCCGATTC CAAAGTGGCC
TGCGAAACCC TGGTTACTAC CGGTCAGGTA ATTTTAGCAG GTGAGGTAAA ATCTACCACT
TACCTGGATG TGCAGCAAAT TGCCCGCGAT GTGATCAAAA AAATCGGTTA CACCAAAAGC
GAGTACATGT TTGAGGCCAA CTCATGTGGT ATCTTATCTG CTATCCATGA GCAGAGCCAG
GACATCAATC AGGGTGTAGA CCGTTCCAGC AAAGAAGAGC AGGGCGCGGG CGACCAGGGC
ATGATGTTTG GTTACGCTAC CAACGAAACC GAAAACTATA TGCCCCTGGC ATTAGACCTT
TCTCATACTC TTTTACAGGA GCTGGCCATT TTAAGGCGTG AGAACAAAGA AATCACTTAT
TTACGCCCGG ATGCCAAATC GCAGGTAACC CTGGAATATT CTGACGACAA TAAACCTGTA
CGCATTGATG CTATCGTAAT TTCTACCCAG CACGATGATT TTGATGAAGA GGCCAAAATG
CTGGCCAAGA TCAAAAAAGA CCTGGTAGAC ATTTTAATTC CGCGCATCAT TGCCAAATAC
CCGCAATACG CACATTTATT TAACGATAAA ATTGAATACC ACATCAACCC TACCGGTAAA
TTTGTAATCG GGGGCCCGCA TGGCGATACC GGATTAACCG GACGTAAGAT CATTGTAGAT
ACTTATGGCG GTAAAGGTGC CCATGGTGGT GGCGCTTTCT CGGGTAAAGA CCCAAGCAAG
GTAGACAGGT CTGCAGCTTA TGCTACCCGT CACATTGCCA AAAACCTGGT TGCAGCCGGT
GTTGCTGATG AGATACTGGT ACAGGTAAGC TATGCCATTG GTGTGGCCCA GCCTATGGGA
ATTTACATCA ATACTTACGG AACAGCTAAG GTTGGTAAAA CTGATAGCGA GATCGCTAAG
ATTGTAGAGG GCTTGTTTGA TATGCGCCCT TACTTTATTG AACAGCGCCT GAAACTAAGA
AACCCTATAT ACAGCGAAAC CGCAGCTTAT GGCCACATGG GCCGCAAGCC GGAAACCGTA
ACCAAAACTT TCAGGTCGCC TAACGGTGAG GAAAAAACAG TTACGGTAGA CCTGTTTACC
TGGGAAAAAC TTGATTTTGT AGATAAAGTA AAAGCTGCTT TTGCGCTGTA A
 
Protein sequence
MSYLFTSESV SEGHPDKIAD QISDALIDNF LAFDADSKVA CETLVTTGQV ILAGEVKSTT 
YLDVQQIARD VIKKIGYTKS EYMFEANSCG ILSAIHEQSQ DINQGVDRSS KEEQGAGDQG
MMFGYATNET ENYMPLALDL SHTLLQELAI LRRENKEITY LRPDAKSQVT LEYSDDNKPV
RIDAIVISTQ HDDFDEEAKM LAKIKKDLVD ILIPRIIAKY PQYAHLFNDK IEYHINPTGK
FVIGGPHGDT GLTGRKIIVD TYGGKGAHGG GAFSGKDPSK VDRSAAYATR HIAKNLVAAG
VADEILVQVS YAIGVAQPMG IYINTYGTAK VGKTDSEIAK IVEGLFDMRP YFIEQRLKLR
NPIYSETAAY GHMGRKPETV TKTFRSPNGE EKTVTVDLFT WEKLDFVDKV KAAFAL