Gene Phep_4091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4091 
Symbol 
ID8255225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4930277 
End bp4931878 
Gene Length1602 bp 
Protein Length533 aa 
Translation table11 
GC content45% 
IMG OID644937755 
Productphosphoenolpyruvate carboxykinase 
Protein accessionYP_003094344 
Protein GI255533972 
COG category[C] Energy production and conversion 
COG ID[COG1866] Phosphoenolpyruvate carboxykinase (ATP) 
TIGRFAM ID[TIGR00224] phosphoenolpyruvate carboxykinase (ATP) 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG CATTTATGCT TAAGCCAGAT TTGGGCTATC TGAATTTGAA TTCAGACAGG 
GCACTTTATC AGCTTAATGT AGCAGAACTG GTTGAAGAGG CCTTGAAAAA CGGGGAAGGT
ACGCTTGCGG ATAGCGGCGC GCTGGCAATT GATACAGGCA GGTTTACCGG CCGTTCGCCA
AAAGACAGAT TTATTGTTTG TGATGAGGTA ACGGAAAAAA CCGTTTGGTG GGGCGACATC
AATATTAAAT TTGATCCCTA TAATTTCGAC ATACTTTTTG AGAAGATCAC TAAACACCTG
AACAGGAACG ATTTTTATGT AAGAGATGCA TATGCCTGTG CCGATGAACG GTATAAAACC
ACCATAAGGG TGGTTACAGA AACGGCTTAC CAGAATCTTT TTGCCAATAA CCTGTTCCTG
CGACCGCAGG TGAATGGGAT CAGTGATCCG GAATGGACCA TTATCGCAGC ACCTTCATTT
TTAGCCGATC CTTTGGTGGA TGGCACACGG CAGTCGAACT TCTCTATTCT TAATTTTACA
AAAAAGATGA TCCTTATTGG CGGTTCGGGA TATACCGGAG AGATCAAGAA GGGGATATTC
TCTGTATTGA ATTTTATTTT ACCTGAACAA AGGCATATAC TGCCTATGCA TTGCTCGGCC
AATGTGGGCA GGGAAGGGGA TACCGCTATA TTTTTCGGAC TTTCGGGTAC AGGCAAAACA
ACGCTTTCTG CAGATCCGGA AAGGGGATTG ATTGGTGACG ATGAACATGG CTGGAGTGAG
GACAGTGTGT TTAATTTTGA GGGTGGATGT TATGCGAAAT GTGTGGACCT TACTGCTGAA
AAGGAGCCCC AGATCTTTAA AGCCATTAAG TTCGGGGCAT TGCTGGAAAA CACCAATTAT
TTTAAGGGGA CGCATACGGT TGACTTTACA AATATCAACA AGACAGAAAA TACCCGTGTG
GCTTATCCGA TCCATTATAT TGACAATGCC GTTATTCCAT CTATAGCGGG TATGCCTAAA
AACATTTTCT TTTTAACCGC GGATGCTTTT GGGGTATTGC CCCCGATAGC CAAACTAAAT
GCCGGACAGG CCATGTTCCA CTTTATATCG GGTTATACGG CAAAGGTTGC AGGTACAGAG
GCCGGGATTA CGGAGCCACA GCTTACCTTT TCGGCTTGCT TTGGTAAGGC CTTTTTGCCT
TTGCACCCAA CGCGTTACGC CAGTTTACTG GGCGAAAAGA TGCAAAAACA CAAAGTGAAT
GTCTGGCTGG TAAATACCGG CTGGAGTGGC GGCGCTTATG GCGTTGGCAG ACGGATGAAG
CTTGCTTATA CCAGGGCCAT GATCTCTGCT GCACTGCAGG GCGACTTTGA AAATATAGCT
TTTGAAGCTG ATCCGGTATT TGGTTTGCAG CTGCCGCTAA GCTGTCCGGG GGTTCCTGCC
GAAATTTTAA ATCCAAGAAA TACCTGGTCC GATGCCCGGG AATATGACCA GAAAGCGAAT
GAGCTTGCCC AGGCTTTTGT AAGCAACTTT AAACAGTTTG AGGCCGGTGC AAGCGAAGAA
ATGCTGGCTT CCTTACCTAA AGTTGTTGAA AACACACATT AA
 
Protein sequence
MSKAFMLKPD LGYLNLNSDR ALYQLNVAEL VEEALKNGEG TLADSGALAI DTGRFTGRSP 
KDRFIVCDEV TEKTVWWGDI NIKFDPYNFD ILFEKITKHL NRNDFYVRDA YACADERYKT
TIRVVTETAY QNLFANNLFL RPQVNGISDP EWTIIAAPSF LADPLVDGTR QSNFSILNFT
KKMILIGGSG YTGEIKKGIF SVLNFILPEQ RHILPMHCSA NVGREGDTAI FFGLSGTGKT
TLSADPERGL IGDDEHGWSE DSVFNFEGGC YAKCVDLTAE KEPQIFKAIK FGALLENTNY
FKGTHTVDFT NINKTENTRV AYPIHYIDNA VIPSIAGMPK NIFFLTADAF GVLPPIAKLN
AGQAMFHFIS GYTAKVAGTE AGITEPQLTF SACFGKAFLP LHPTRYASLL GEKMQKHKVN
VWLVNTGWSG GAYGVGRRMK LAYTRAMISA ALQGDFENIA FEADPVFGLQ LPLSCPGVPA
EILNPRNTWS DAREYDQKAN ELAQAFVSNF KQFEAGASEE MLASLPKVVE NTH