Gene Phep_4086 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4086 
Symbol 
ID8255220 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4927059 
End bp4927529 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content44% 
IMG OID644937750 
ProductTonB family protein 
Protein accessionYP_003094339 
Protein GI255533967 
COG category 
COG ID 
TIGRFAM ID[TIGR01352] TonB family C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTTGACA AGGAGCCTGT TCAGATAGAG GACCTTAAAA AAGCGGATCC GGGCCAGAAA 
ACCATTGCCG GTGATCCTGA TGCGGATATC GTAATTGCTA CTGCAGCAGG TGAAGGCCCT
AAGCAGGCAG CAGTTGTGGA AGATACCAAG GTGTATGACT TTGTGAGCAT TGAAACTCAG
CCAGGTTTCC CTGGTGGTAT GGAGAAATTT TATGCTTACC TGAGAAAAGC AGTGAAGTAT
CCTCCTGTAG CACAGGAGAA CAATATCCAG GGTAAAGTAT TCTTATCGTT CGTTGTTGAG
AAAAACGGTG AACTGACAGA TATTAAAGTG GAAAGAAAAC TTGGTGGTGG TACCGATGAG
GAAGCCATTA GGGTATTAAA AGCCAGTCCA CGCTGGACCC CTGGTATTCA AAATGGTAAA
CCTGTACGTG TAAAGTATAA TATTCCAATC AGCTTTACCT TATCGAATTA G
 
Protein sequence
MVDKEPVQIE DLKKADPGQK TIAGDPDADI VIATAAGEGP KQAAVVEDTK VYDFVSIETQ 
PGFPGGMEKF YAYLRKAVKY PPVAQENNIQ GKVFLSFVVE KNGELTDIKV ERKLGGGTDE
EAIRVLKASP RWTPGIQNGK PVRVKYNIPI SFTLSN