| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4083 |
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| Symbol | |
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| ID | 8255217 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4924101 |
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| End bp | 4925816 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644937747 |
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| Product | Tetratricopeptide domain protein |
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| Protein accession | YP_003094336 |
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| Protein GI | 255533964 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.446531 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 35 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATGA CAAAGAAAGC AATAACCTTA GGTTTAGGTT TAGTAGTGAT GGGTTCTGCC
TCTTTTGCTC AGAGCTTAAG TGACGCAAAA AAGGCGATAG ATGCCGAGCA GTATCAGAAA
GCGACTTCGA TGCTTAAAAC ATTGGTGAGT TCACAGGCCA GCAAAGGCGA GAACTACTAT
AATTTAGGCG AGGTTTACCT GAAGATGGAT TATGTGGATT CGGCACGTGC AGTATTTACC
AAAGGTGTTA CAGCTGACCC AAAGAATTCA TTAAATTATA TTGGTCTGGG AGAGGCTGAT
CTGGTTTCCA ATAACCCGAC ATCAGCAAAA ACCAATTTTG CAAAGGCAGT GGAGGTTTCT
TCGAAAAAAG ATTGGATTCC TCAGTTGTAT ATAGGAAAAG CCTATATTGC TACTGATAAG
CCTGATTTTG AAGCCGCTTT GCCTTATTTA CAAAAAGCAG AAGAATTGGA TGCAAATGAT
AAAGATGCTG AAACTTTTAT TGCGCTAGGT GATTATTATG CCTTGCAAAA GAAAAATTCT
GAGGCTTTAC AAAACTACAT GAGAGCGGGA AATATCAATG AGAGTATTTT AAGGGCCCCT
GTTCAGATTG GAAGAATGTA CAAAGAATCA AGAGCATTTA CCGAGTCTGA GCAGCAATTA
AAAGAGGTGA TCGCTAAAGA TGCCAATTAT GGACCTGCTT ACAGGGAGAT CGCTGAACTT
TATATGCAGT GGGCTATCCA GATGCCAAAC GAATTTGCAG CTAAATCTGC CCAGGCCCTG
GAAAACTATA AAAAATATCT TGACCTGACC GACAAATCTT ATGAATCAAG ATTGCGTTAT
GCCCAGTTTC TGTTCTATGC AAAGGATTTT AAAACCCTTG AGCAGGAATC TGCAACTCTG
CAGCAAATGA ACCCCAATGA CCCTAAAAAT CTTGTGGTAA CAAGGTTGCG TGGTTATTCG
GCATTCGAGA ACAAGAACTT CCCTCAAAGT TTGGAATACA TGAACGATTT CTTTGCAAAA
GCCAAAGATA CAAGCCGTAT TGTAGCTTCA GATTACTTAT ATCTGGGAAG GGCTCAGCTG
GCAGCCGGAA ACGATAGCCT GGCCTTGATC AACATTACCA AAGCAGTTGA GAAGGATTCT
ACGAATGTTG AAGCATTGGC TGATGTGGCA AAAGCTTATT TTGATGCTAA AAAATATGCG
AAATCTGCAC AGGTGTACGA CAAGGTGATC AAAGCTGGTC CGAATGCAAA AGGCGTATTG
TACAGCTATT TTTATGATGG CCTGGCTTAT TATTTCGATT ACGCCAATCA GTACAGTGCC
AAATTGAACC CTTCAAAAGA CCTGTTGGTT AAAGCTGATT CTGCTATTGC AAAAGTAGCG
CAGCTTGCCC CTGAAACCAC GGATGCTTAT CTGTACAGAG GACGGATCAA TAACCTGCTT
GACGATGAAG CCAATCCTAA GGGACTATTG GTGCCTCATT ATGAAATGTT CATCAAAAAA
GTAACCGTTG ACAAGCCTGA TCTTGCTCCT GCAAATGCCA GAAAATTATC TGAAGCATAT
GATAACCTGG CAGGTTTTTA TGCGATAAGC GATAAGGCAA AAGCTATTGA CTACCTGAAT
AAAAGTATTG CGGCTAACCC GGCTGGTACT TTTGCTCCGG CTAAACTGAA AGAGTTAACC
GCTCCTGCAG CTAAGGCCCC GGTAAAGAAA AAGTAA
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| Protein sequence | MKMTKKAITL GLGLVVMGSA SFAQSLSDAK KAIDAEQYQK ATSMLKTLVS SQASKGENYY
NLGEVYLKMD YVDSARAVFT KGVTADPKNS LNYIGLGEAD LVSNNPTSAK TNFAKAVEVS
SKKDWIPQLY IGKAYIATDK PDFEAALPYL QKAEELDAND KDAETFIALG DYYALQKKNS
EALQNYMRAG NINESILRAP VQIGRMYKES RAFTESEQQL KEVIAKDANY GPAYREIAEL
YMQWAIQMPN EFAAKSAQAL ENYKKYLDLT DKSYESRLRY AQFLFYAKDF KTLEQESATL
QQMNPNDPKN LVVTRLRGYS AFENKNFPQS LEYMNDFFAK AKDTSRIVAS DYLYLGRAQL
AAGNDSLALI NITKAVEKDS TNVEALADVA KAYFDAKKYA KSAQVYDKVI KAGPNAKGVL
YSYFYDGLAY YFDYANQYSA KLNPSKDLLV KADSAIAKVA QLAPETTDAY LYRGRINNLL
DDEANPKGLL VPHYEMFIKK VTVDKPDLAP ANARKLSEAY DNLAGFYAIS DKAKAIDYLN
KSIAANPAGT FAPAKLKELT APAAKAPVKK K
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