Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4065 |
Symbol | |
ID | 8255199 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4907875 |
End bp | 4908579 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644937729 |
Product | protein of unknown function DUF558 |
Protein accession | YP_003094318 |
Protein GI | 255533946 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCATGTTT TTTATACGCC TGACATCGGT TCGGATGTGT ATGTATTAAA TGAGGAAGAG AGCAGGCATT GCACCAGGGT ATTGCGTCTG GGTACTGGTG CCGTTGTTTA TCTGATTGAT GGCATTGGCG GCCTGTATAA GGCCGAAATT ACCGGTGAAA CTAAAAGACA GGTAAATCTA AGGATCATTG AGGTCCAAAA AGAATATCAC AAACGCCGGC ATTACCTTCA CATTGCTGTC GCACCTACAA AAAATATAGA CCGGCTGGAG TGGTTCCTGG AAAAGGCTAC TGAAATCGGC ATTGAAGAAA TCACCCCGGT GATCTGCGAC AGGTCGGAAC GTAAGGTGGT TAAAGAAGAC CGTTTAAATA AAGTGATCAC TGCCGCAGTA AAGCAGTCGT TACAAGCCTA TCACCCCCGC TTAAACCCTC AAATTAGCCT ATCAGCTTTT CTGAAGCAAA AGAATGACAG CCTTAAAATG ATAGCCCATT GTGTAGATGC GGCAGCCAGA CAGTACATTA GTGATGTGGT AAAGCCTGCG GGCAGCTATA CGATACTGAT CGGACCGGAA GGTGATTTTA CAGGCCAGGA AATTGAAATG GCTTTGCAAA GCGGTTATAA ACCCTTAACT TTAGGTAATA CCCGGTTGCG GACAGAGACA GCTGCCTTAG CGGCATGTTT TGAAGTGAAT TATTTGAACA GATGA
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Protein sequence | MHVFYTPDIG SDVYVLNEEE SRHCTRVLRL GTGAVVYLID GIGGLYKAEI TGETKRQVNL RIIEVQKEYH KRRHYLHIAV APTKNIDRLE WFLEKATEIG IEEITPVICD RSERKVVKED RLNKVITAAV KQSLQAYHPR LNPQISLSAF LKQKNDSLKM IAHCVDAAAR QYISDVVKPA GSYTILIGPE GDFTGQEIEM ALQSGYKPLT LGNTRLRTET AALAACFEVN YLNR
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