Gene Phep_4048 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4048 
Symbol 
ID8255182 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4891634 
End bp4892392 
Gene Length759 bp 
Protein Length252 aa 
Translation table11 
GC content45% 
IMG OID644937712 
Productglycosyl transferase family 2 
Protein accessionYP_003094301 
Protein GI255533929 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCAG CCAAACCCAC CTTATCCGTA ATTACAGTAG TATACAATAA TGTAAAAGAT 
ATTGAGCGTA CCATGCTTTC TGTCCTGAAC CAGACCTATC CCAATATCGA ATACCTGCTG
ATCGATGGCG GATCTACGGA TGGGACCAAA GACATCATCT ATAAATATAA ATCCCGGCTT
GCACAGTTCA TTTCAGAACC CGATAAAGGT ATTTATGATG CCATGAACAA AGGCCTGGCC
CTGGCTACCG GTAATTACGT GCTGTTCATG AACTCCGGCG ACGAACTCTA TGCCTCCGAT
ACCGTTGCGG AGGTTTTTGA TACGGCCAGC TCTGCAGATA TCTATTATGG TGAAACAGAA
ATGTACAACG AAAAATGGGA AAGCCTGGGC CAGCGCAGAC ACTGCAGCCC CGAAAATTTC
AACTGGAAAA GCTTCCGCTA TGGCATGAGC ATCAGTCACC AGGCCATTTA TGTAAAACGG
AGCCTGGCTG CTCCATTCGA CCTCAGGTAT AAATACAGTG CTGATATCGA CTGGATCATC
AAAGCCGCAA AAAAAGCATC AAGCATCGTA AACACCCATA TGTATGTGGC CAAATACCTG
GTTGGCGGCA TGTCCAAGAA AAAACACCTG GCCAGCCTGA AGGAAAGGTT CCGGATATTT
ACCAAATATT ACGGACTGGT GCCTAACCTG ATCAATCACA TCTTTATCAG CTTTAACCTG
GTGCAATACT ATTTCAGGCA CGGAAAAACC AACGATTAA
 
Protein sequence
MTAAKPTLSV ITVVYNNVKD IERTMLSVLN QTYPNIEYLL IDGGSTDGTK DIIYKYKSRL 
AQFISEPDKG IYDAMNKGLA LATGNYVLFM NSGDELYASD TVAEVFDTAS SADIYYGETE
MYNEKWESLG QRRHCSPENF NWKSFRYGMS ISHQAIYVKR SLAAPFDLRY KYSADIDWII
KAAKKASSIV NTHMYVAKYL VGGMSKKKHL ASLKERFRIF TKYYGLVPNL INHIFISFNL
VQYYFRHGKT ND