Gene Phep_4041 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4041 
Symbol 
ID8255175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4885259 
End bp4885825 
Gene Length567 bp 
Protein Length188 aa 
Translation table11 
GC content44% 
IMG OID644937705 
Producthypothetical protein 
Protein accessionYP_003094294 
Protein GI255533922 
COG category[S] Function unknown 
COG ID[COG4627] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.692603 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCAGC TGAAGTCCAG GATCAGGAAA ACAGATGGCG ATCTGTACAT CATCATTGGC 
GCCCACAATA CCAATTACGA GAACTGGCTG CCTACCAATA TAGAAAACCT CAACCTGCTG
GATAAAGCTT CTTTCCAAAA CCTGTTTGAA GAAAAAAAGG TAAGCCGCTT TTTAGCAGAG
CATGTATTTG AGCACATCAG CTATGAGGAT GCCCTTATTG CCCTTAAAAA CTGTAACCAG
TACATGAAAA AAGGCGGCAC CATACGTATA GCCGTACCAG ATGGCTTCCA TCCCAACCCC
GATTACATCA ATATGGTCAA ACCAGGGGGC ATTGGCGAAG GGGCACACGA CCATAAATTG
TTGTACGATT ATAAAAAACT GGGCAAAGTA CTGGAAGATG CCGGCTTTAA AGCTGTTCCC
CTGGAATATT ATGACGAACA GGGACAATTC CATTTTACGG AATGGGACAG TAAAGATGGC
CATGTACACC GCTCTAAAAG GTACGACAAA CGCTTTAACG AGCCGCTCGG TTATTCTTCT
TTAATTGTTG ACGGCATAAA AATTTAA
 
Protein sequence
MIQLKSRIRK TDGDLYIIIG AHNTNYENWL PTNIENLNLL DKASFQNLFE EKKVSRFLAE 
HVFEHISYED ALIALKNCNQ YMKKGGTIRI AVPDGFHPNP DYINMVKPGG IGEGAHDHKL
LYDYKKLGKV LEDAGFKAVP LEYYDEQGQF HFTEWDSKDG HVHRSKRYDK RFNEPLGYSS
LIVDGIKI