Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4033 |
Symbol | |
ID | 8255167 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4876169 |
End bp | 4878646 |
Gene Length | 2478 bp |
Protein Length | 825 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644937697 |
Product | hypothetical protein |
Protein accession | YP_003094286 |
Protein GI | 255533914 |
COG category | [S] Function unknown |
COG ID | [COG4485] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.411624 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.743107 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAATT GGTTAAAAGC GAATGGCATT CATCTGGCCA TCATTGGATT TTTTATACTC ATCTGTTTTG TCTATTTCAG TCCGGTTTTA CAAGGTAAAG GTCCGCAGCA AAGCGACGTA TTGCAAGCTA AGGCCACTGC CAAAGAGATC ATGGACTACA AGGAAAAGGA CGGTAAAGGG CCTTTATGGA CCAACCAGAT GTTTGGTGGG ATGCCTGCTT ATCAGATCTG GGTACAGCAC CCTTACAATG CGGCCACCTA TGTGATCGAT TTCATGAAGG CGGTGTTCCC GGATCCTGTA GACGTAGTTC TGATGTACCT GCTTGGTGCT TACCTGCTGT TTTGTGTATT GAAGGTAAAT CCCTTACTGG CAGCAGCGGG GGCTATTGCT TTTGCTTTTA CCTCTTATAA TTTCCAGATC ATTGCTGCAG GACACAGCAA TAAGGCCCTG GCCATTTCTT TTCTGGCGCC TATAGTTGCC GGGATCATTT TGACCATCAG GGGTAAATAC TGGCTGGGGG CCAGTTTAAC TGCTTTGTTC CTGGCGCTGG AGATCAGGGC AAACCATATT CAGATGACCT ATTACCTGAT GATTGCCCTG CTTATTTTTA TAGGCATAGA GCTTTATCAT GCCATAAAAG GAAAGAAGGT AGCGGCCTTT GGAAAGTCGA TGGGCTTCCT GGCCATAGCA TTGGTACTGT CCCTGATGGT AAATGCGGGT AAATTATGGA CGACTTACGA ATATGGTAAA GAATCGAACA GGGGCAAATC TAATTTAACA ACGGACAGTG CCGAAGAAAA GAACGGGCTT TCCAAAGAAT ACGCTTATGG CTGGAGCCAG GGTGTAGGTG AGAGCTTTAC TTTCCTAATC CCCAATTTAT ATGGGGGCGG GACAGGGATT GATGAACTGG TGAAACCCGA GAGCAATACC TATAAAGCTT TACAGAATGT GACCGGTGGT GATCCGAGGC CAGCCATACA GCAGCTGGCG GGACAGGTTG GCCTGCAGCA GTACTGGGGA GAAAAACCCT TTACTTCGGG GCCTTATTAT TTTGGTGCCA TTGTTTGTTT CCTATTTGTA TTTGGCTTGC TGATTGTAAG AAGCCGGTTA AAATGGTGGA TATTGGGTAC GACCATTTTG TTTATGCTGC TTTCTTTTGG CAGGCATTTT CCATTGGTCT CGGATCTGTT TTTTGAATAT TTCCCGATGT ACAATAAATT CAGGGCAGTA GAATCTATTC TGGCCCTGGT AGGTTTAATG GTGCCTGTTT TGGCTTTTCT TGCTGTAAAA GAAACCCTGG AAGGGACTAT GGATCAGAAA ACACTGGGTA AGAAACTGAC GGTTGCCGGT GCCATAACTG GTGGTTTTAC TTTACTGGTG GCAGTAATGC CGAGTGCATT TTTCAGTTTT ACGGCATCAA ACCACCCGCA AATGGTGCAG GTGCTGACCC AGATTGCCCA GAACAATGCC GGCGTGGCAC AAAGTATTGC CAATGCATTG GTTCAGGATC GTATTGATAT TGCCCGTGCA GATGCCTTGC GCTCTTTATT GTTTATAGCA ATAGGCTATG CGCTGATCTG GGCATTGATC AATAAAAAGA TGGGCTTGCA GACCGTAATG GTTTTGCTGG GGCTTGCCGT ACTGATTGAC ATGTGGCAGG TAGACCGCCG TTATTTAAAC AACAGCAATT TTGTGAGCAA GTCGGATCTG AAAAATCATT TTCAGCCGAG AGAGATCGAC AACCTGATCC TGGCCGATAA AGACCCGGAT TACCGGGTAC TGGACCTGAG CATTGCTACT TTTCAGGATG CGAGTGCTTC GGCCTTCCAT AAAACGATAG GTGGGTACCA TGCGGCTAAA CTGAAACGTT ATCAGGAGCT GATCGATAAA CAGTTCTCGA AAAGCATTAA CCAGGATGTA GTGGATATGC TGAATACCAA ATACATTATT ACGCAGGACC AGCAGACAGG TTCGTACAAA ATGCAAAGGA ATGCAACCGC TGCAGGGCAT GCCTGGATTG TGTCTCATGT TCAATTTGCA AAGGATGCAG ATGAAGAAAT GAAGGCCATT AACAGTTTTG ACCCTAAAAA GGAAGCCATT GTTGATGTAA GGTATAAACA ACTGATCAAT GAGAAACGTC TTGGCTCTGG TGTCGGGGCA ATGATTACAC TGGACAGTTA TCATCCGGAC CACCTGGTTT ATTCTTACAG TGCGCCAACT GATGTAATTG CCGTATTTTC GGAGATTTAT TACGATAAGG GCTGGAACAT GTATGTAGAT GGGGCTGAGA AGCCTTATTT CAGGGCAGAT TATGTTTTGC GGGCTGCCCA GCTGGAAGCA GGCAACCATA AAATAGAGTT TAAGTTTGAG CCGGTTTCGT ATTATGCAGG TGAAAAGATC TCTTTACTAG GCTCAGTTTT ATTGATTGCA GGATTGGGAT TTGCGTTTTA TTCGGAGAAA AAGGGAAAAA AACAATGA
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Protein sequence | MNNWLKANGI HLAIIGFFIL ICFVYFSPVL QGKGPQQSDV LQAKATAKEI MDYKEKDGKG PLWTNQMFGG MPAYQIWVQH PYNAATYVID FMKAVFPDPV DVVLMYLLGA YLLFCVLKVN PLLAAAGAIA FAFTSYNFQI IAAGHSNKAL AISFLAPIVA GIILTIRGKY WLGASLTALF LALEIRANHI QMTYYLMIAL LIFIGIELYH AIKGKKVAAF GKSMGFLAIA LVLSLMVNAG KLWTTYEYGK ESNRGKSNLT TDSAEEKNGL SKEYAYGWSQ GVGESFTFLI PNLYGGGTGI DELVKPESNT YKALQNVTGG DPRPAIQQLA GQVGLQQYWG EKPFTSGPYY FGAIVCFLFV FGLLIVRSRL KWWILGTTIL FMLLSFGRHF PLVSDLFFEY FPMYNKFRAV ESILALVGLM VPVLAFLAVK ETLEGTMDQK TLGKKLTVAG AITGGFTLLV AVMPSAFFSF TASNHPQMVQ VLTQIAQNNA GVAQSIANAL VQDRIDIARA DALRSLLFIA IGYALIWALI NKKMGLQTVM VLLGLAVLID MWQVDRRYLN NSNFVSKSDL KNHFQPREID NLILADKDPD YRVLDLSIAT FQDASASAFH KTIGGYHAAK LKRYQELIDK QFSKSINQDV VDMLNTKYII TQDQQTGSYK MQRNATAAGH AWIVSHVQFA KDADEEMKAI NSFDPKKEAI VDVRYKQLIN EKRLGSGVGA MITLDSYHPD HLVYSYSAPT DVIAVFSEIY YDKGWNMYVD GAEKPYFRAD YVLRAAQLEA GNHKIEFKFE PVSYYAGEKI SLLGSVLLIA GLGFAFYSEK KGKKQ
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