Gene Phep_4029 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_4029 
Symbol 
ID8255163 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4872220 
End bp4872975 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content39% 
IMG OID644937693 
Productpantothenate kinase 
Protein accessionYP_003094282 
Protein GI255533910 
COG category[K] Transcription 
COG ID[COG1521] Putative transcriptional regulator, homolog of Bvg accessory factor 
TIGRFAM ID[TIGR00671] pantothenate kinase, type III 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.43701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATAACC TGGTTATAGA TATTGGGAAT ACAAATAGTA AGCTGGCTGT TTTTAAAGAA 
AAAACGTTAG TAGACTACCA GGTTCTTAAG CAGATTGTTC CGGCTGATCT TGTAAAATTA
ATAACCCGGT ACGGGGTGCT CAATTCAACT GTTTCCAGTG TTGCTGAAGA TTTACAGGAA
GTAATCAGTG TTTTAACATC AAATACAAAT TACATTCCTT TCTCTACAAA TATCAATACG
GGGATTAAAA ACAATTACCG GAGCCTGTCT ACACTGGGTT TGGACCGTTG GGCCAAAGTT
ATTGCAGCGA ATAGCTGTTA TGCAGGGAAA AACTGTTTGA TGATAGATGC CGGGACCTGT
ATTACCTACG ATCTGCTGAA CAGTGAAAGT GAATACTCGG GGGGAAGCAT CAGCTTAGGT
GTGGCCATGC GTTTTAAAGC GCTGCATCAT TTTACGGGCC GGTTACCACT GGTAACCTGG
AACAGGGAAA ATATAGAGAT ACCGCTTGGT TCGGATACCG TTTCGGCAAT TAAGAATGGT
GTTTTGCAAG GGATAGTTAA TGAAGTGGAG GGGTTTATAT CTGCTTATAA TAAAGAAAAT
AAAGGCCTGA CGGTACTGTT AACAGGTGGT GATGCTGCTT TTTTGCTAGA ACAATTAAAA
AACAGCATCT TTGCGCCTCA AATTATACAC GATCCGTATT TGGTATTAAA AGGATTAAAT
GAAGTTATTG CATTTGAATA TGTACAAAAA AATTAA
 
Protein sequence
MHNLVIDIGN TNSKLAVFKE KTLVDYQVLK QIVPADLVKL ITRYGVLNST VSSVAEDLQE 
VISVLTSNTN YIPFSTNINT GIKNNYRSLS TLGLDRWAKV IAANSCYAGK NCLMIDAGTC
ITYDLLNSES EYSGGSISLG VAMRFKALHH FTGRLPLVTW NRENIEIPLG SDTVSAIKNG
VLQGIVNEVE GFISAYNKEN KGLTVLLTGG DAAFLLEQLK NSIFAPQIIH DPYLVLKGLN
EVIAFEYVQK N