| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4026 |
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| Symbol | |
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| ID | 8255160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4868160 |
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| End bp | 4870256 |
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| Gene Length | 2097 bp |
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| Protein Length | 698 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644937690 |
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| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
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| Protein accession | YP_003094279 |
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| Protein GI | 255533907 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGATTAA TGACATTTTT GCGGAACCGC GCGGGCTATA TCCTGGTAGG GGCCATCGGT
TTTGCAATTG TTGCATTTTT AGTTGGTGAT GCAATTAACG TGGGTAAGCC TTTCTGGGCT
GAATCTCAAA AGGTTGTAGG GTCAGTTGAC GGTGAAGAAA TTAGCATAGA TCAGTTTGGT
CCGAAAGTAG ACCAGAGTTT AGCGCAATTT AAACAGCAAT ATGGTGGTTC CGGCAATGCA
CAGATGCAGG CTATGGCCGT AGATAATGTG TGGCAGGGTG AAATTGCCAG TATTCTTTTA
GGTAAGGAAT ATAACCGTTT GGGTTTAACA ATATCCAGTG ATGAGCTGTT TGACCTGCTG
CAGGGCAAAA ACCCGAGTCC GCTTATTGTA CAATATTTTG GCAACCCTCA GACGGGAGAA
GTAAACCGCG CTGAAGTATT GGCTTCCTTA AAACAACAGG ATAAAAATCC ACAGTTAGAG
AAGCAATGGG AGCTTTTACA GAATGAGATT GAAAAGCAGG CACTTCAGAA AAAATATGCC
AACCTGATCA GTAATTCTAT TTATGTGACT ACGCTGGAGG CCAATGATGA TTACCAGAAC
CGTAATAAAC TGGCGAGCTT CAAGTATACC CTGCTGGATT ATGCAGCTGT GCCGGATGCG
ACAGTAAAAC CAACAGAGTC TGATTATTCA GATTACTATA ATGAAAACAA GAAACGTTTT
GAAAATCCAT CGGAGACGCG CTCGTTTGAA TATGTGGCTT TCAGTGTAAG CCCTACAAAA
GAAGATTCGG CGGCAGTTAA AACCCAGGTT GATAAACTTG CGGCTGATTT TCGGACGGCA
GCGAATGATT CCCTGTTTGC AGCAGTTAAC TCTGATGTGA AGGTCCCATA TGCGTATATG
TCTAAAGGCA AACTGGATCC TGCTGTTGAT TCAGTAGTGT TCAACCTTCC TGCAGGCAGC
TATTATGGTC CAAGATTTTC TGGAAATTCC TATAAACTGA TCAAGGTGAT TGATACGCGT
TTTTCTCCGG ATTCGGTAAA AGCAAGCCAT ATTCTACTTG ATCCTTCTAA AATGGGTGGT
GCAGATAAAG CTAAAAAACT GGCTGATTCC TTAAAAACAT TGGTGCAGAA CGGAGCTAGT
TTTGCTGCAT TAGCTAAACA ATACAGCATT GACGGATCTA AGGATAAAGG TGGCGAGCTG
GGCACATTTA GCCGTGGACA GATGGTACCT GTATTTGAAG ATGCGGCATT TAACGGCAAG
GCTGGTGACC TTAAAGTGGT AACTTCCCAG TTTGGCGTGC ACCTGATCAA AATCGAGAAA
CAGATTGGCT CTTCAAAAGT GGCCAAATTG GCCTATATAG AAAAAGGACT GGCTTCGAGC
AATAAAACCA GGGATGCAGC TTATAAAAAA GCAAGTGCTT TCCTGAATGA GGTGAAAAGC
AATAATTTTG CTGAACTGGC CCAGAAAAAA GGGTATACAG TTGGTGTTGC AGACCGGGTT
ACCCCTACAC AGGGTTTTGC CCCGGGCCTG GACAGTCCGC GTCAGCTGAT CCGTGATGCT
TACGCAACTG ATAAAGGTGA AATACTGAAA GAGGTTTACC AGATGGACAA TGCTTATGTA
GTGGCCCGTG TAACTGATAT TAAACCAAAA GGCACGCTTT CGCTGGAAGA TGTGAAGAAA
GAAATTGAGC CGATGGTACG TACAGCAGTT AAAGCTAAAA TGCTGACTGA AAAAATGAAC
AAAGCCTTGC AGGGTTCAGC TAATCTGGCC CAGGTAGCGC AGAAGCTGGG TAAAACAGTA
GCACCTGTTG AGAATATCGT ATTTGCAAAC CCTATTATCC CGGGCGCAGC CCAGGAAAAT
AAACTGGTAG GTTCGGTTTT TGGATCCCAA CCTGGAAAAC TTTCAAAAGC TATAGATGGT
ACAGCGGGTG TATATGCTTT TACGGTAGAT GGTTTTAGCC AGCCAGCTCC TTTAGCGAAC
ACTTACAAGC AAAAAGAAGC CATGATGCAG GCAGGTGGAC AGCGCGCTTT AGGTGCGGCT
TTCCAGGCCT TACAGGATAA AAGTAAGATA AAAGACAATA GGGTGAAATT CTATTAA
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| Protein sequence | MGLMTFLRNR AGYILVGAIG FAIVAFLVGD AINVGKPFWA ESQKVVGSVD GEEISIDQFG
PKVDQSLAQF KQQYGGSGNA QMQAMAVDNV WQGEIASILL GKEYNRLGLT ISSDELFDLL
QGKNPSPLIV QYFGNPQTGE VNRAEVLASL KQQDKNPQLE KQWELLQNEI EKQALQKKYA
NLISNSIYVT TLEANDDYQN RNKLASFKYT LLDYAAVPDA TVKPTESDYS DYYNENKKRF
ENPSETRSFE YVAFSVSPTK EDSAAVKTQV DKLAADFRTA ANDSLFAAVN SDVKVPYAYM
SKGKLDPAVD SVVFNLPAGS YYGPRFSGNS YKLIKVIDTR FSPDSVKASH ILLDPSKMGG
ADKAKKLADS LKTLVQNGAS FAALAKQYSI DGSKDKGGEL GTFSRGQMVP VFEDAAFNGK
AGDLKVVTSQ FGVHLIKIEK QIGSSKVAKL AYIEKGLASS NKTRDAAYKK ASAFLNEVKS
NNFAELAQKK GYTVGVADRV TPTQGFAPGL DSPRQLIRDA YATDKGEILK EVYQMDNAYV
VARVTDIKPK GTLSLEDVKK EIEPMVRTAV KAKMLTEKMN KALQGSANLA QVAQKLGKTV
APVENIVFAN PIIPGAAQEN KLVGSVFGSQ PGKLSKAIDG TAGVYAFTVD GFSQPAPLAN
TYKQKEAMMQ AGGQRALGAA FQALQDKSKI KDNRVKFY
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