| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_4005 |
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| Symbol | |
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| ID | 8255139 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4836635 |
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| End bp | 4838122 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937669 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003094258 |
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| Protein GI | 255533886 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0243804 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATCGA TATATAAAAT ACTTGCAGTT CTGGTGATGG TTGCCGGAGT AAGCTGCAAA
AAGGAATTAG ATAAAGCCCC TATAGGCCTG ATTACTTCTA ACCAGGATGA GACAGATCCT
AAACTCAATA TTGTGGTGTC ATCCGTAACC TCATCCTATC GCTTACTGTC CAGCACGCTG
AACATCATTG GTCAGTGGGG CTGGGATGAT GGTACCGTTT TGAGAAATGA CTTTATTTTA
CAGGACATTG CATCGGGCGA TATGCAGAAA AAATGGAACC CTGATGGCGA CCAGGCCTGG
ATGGACCAGT TCTCTAAATT TAATTTTACT GCATCGAATG GTGGTTTTAA TGGCCAGTGG
AGTTACGACT TTGAAGGGAT TTCGCGCTGC AACAGGTCTA TCAATTATTT GACCGACCCG
GTGGTGGTTG CAAAAATCGG GATAGACGAA ACGCTGAAAA ACAGATTGCT GGGTGAGGTT
TATTTTTTAA GGGCATTCTA TTATTTTGAC CTGGTAAACA ATTTTGGGGA TGTGCCATTG
TTGTTAAAAC CACTTAAAGA TTTTTCGGAA GCTTATGAAG TTGCCAAACG GGTGCCAAAA
GAACAAGTGT GGGCACAGAT CAGTGCCGAC CTTGCCTTAG CCAAGCCTTT GCTTCCGGCT
ACCAAATACA TTGATAATGT GGAGAAATGG CGGGCCTCTA AAGGGGCGGT AATTGCTTTA
CAAGCTAAAG TGGCGCTTTA TAATAAAAGA TGGACGGATG TGCTGAGCAG CATTACAGAG
CTGGAGACTT TAAGGTTTTA CAGTTTGAAC AGCAATTACT TCGATAGTTT TGACATGGCA
AAGGAATTTG CCGATAATGA GGTGATTTTT GCCTACGACC ACCAGTCGGC CAAAACCCCA
CCCATGGGCA ACGGCCTGTG TGCCCTGGCC GGCTGGGGAT TTATTGCGCC TACCACCAAT
TTTATCAATG CTTTTGAGGC CAATGACCCG CGGTTGGGTT ATACTGTAAA TGTGCAAAGT
CAGAGTGTAT ACAAAGTATT CGGGGCCTTA AACGATGGCA ATAAAGGGAA TGAGGATGCG
GCCAGTAATA AAATATACAT CAGATGGGCC GATGTTTTAC TTTGGAAGGC AGAGGCTTTG
CTGGAGACAG CTTCTTATCC TGCGGCCATA GGAGTGATCA ATAGCATCAG GGCCCGGGCA
AGGACCAGTG TAGCTGCGAA TGGCAGTTTA CCCCCTGCTG GCACGCTACC TGACAGAAAT
GTAGCTTCGA CAGATAAAGC ACAGATTAAA GACTGGCTGG TAAAAGAGCG CAGGGTAGAG
CTGGGCTTTG AATCGCAGAG ATTTAATGAC CTGAAAAGGT GGGGCATGGC AAAAGACTTT
TTGAAATCCG TAGGTGTAAA CTTCCAGGAC CGCAATTATG TATATCCAAT CCCTCAGGGA
GAGGTGGATA AATCGGGAGG AACTATTGTT CAGAATCCAG ATTATTAA
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| Protein sequence | MKSIYKILAV LVMVAGVSCK KELDKAPIGL ITSNQDETDP KLNIVVSSVT SSYRLLSSTL
NIIGQWGWDD GTVLRNDFIL QDIASGDMQK KWNPDGDQAW MDQFSKFNFT ASNGGFNGQW
SYDFEGISRC NRSINYLTDP VVVAKIGIDE TLKNRLLGEV YFLRAFYYFD LVNNFGDVPL
LLKPLKDFSE AYEVAKRVPK EQVWAQISAD LALAKPLLPA TKYIDNVEKW RASKGAVIAL
QAKVALYNKR WTDVLSSITE LETLRFYSLN SNYFDSFDMA KEFADNEVIF AYDHQSAKTP
PMGNGLCALA GWGFIAPTTN FINAFEANDP RLGYTVNVQS QSVYKVFGAL NDGNKGNEDA
ASNKIYIRWA DVLLWKAEAL LETASYPAAI GVINSIRARA RTSVAANGSL PPAGTLPDRN
VASTDKAQIK DWLVKERRVE LGFESQRFND LKRWGMAKDF LKSVGVNFQD RNYVYPIPQG
EVDKSGGTIV QNPDY
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