Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_4000 |
Symbol | |
ID | 8255134 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | + |
Start bp | 4830365 |
End bp | 4831330 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644937664 |
Product | protein of unknown function DUF6 transmembrane |
Protein accession | YP_003094253 |
Protein GI | 255533881 |
COG category | [E] Amino acid transport and metabolism [G] Carbohydrate transport and metabolism [R] General function prediction only |
COG ID | [COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCTCAC AATTAAACAA AAAAGCCTCT CCCTTAATCG TTATCCTGGC CTTTGCCATA GTATATATCG TTTGGGGCTC TACTTACTTT TTTATCCAGA AAGCCCTCGC CGGCTTTCCT CCTTTTATCC TTGGTGCCTT CAGGTTCCTT GCGGCCGGAC TGTTGTTAAT AACATGGTGC AGCATTAAAG GGGAAAAGAT TTTTGATAAA AAAAGTATCA GACAGGCTGC CATAGCGGGC ATACTGATGC TTGGGATAGG CAACGGACTG GTGATCTGGG TAGAACAATC TATACCAAGC GGATTGGTTG CCATCCTGGT TTCATCTGCA GCCATGTGGT TCGTAATTCT GGACAAACCG AAATGGAAAG AAAACCTGCA AAGTACCTCT ACAGTAATGG GATTGATTAT AGGGTTTATA GGTGTTATCC TACTATTTGC AGAACAGGTA ATGCATACGC TGAACAACAA CCAGAGCAAC ACTCAAATTG TAGGTATTGT ACTTTTACTG CTGGCACCAA TAGGATGGGC AGCGGGTTCC CTGTATTCAA AATACAATAC GACCACTACC GTTTCGGTAT CTGTAAATAC CTCCTGGCAA ATGCTGGCCG CCGGTATCGC TTTTATGCCG GGTATCCTGT TCAATTCAGA ACTTAAAGAT TTCGATTGGC ATATGGTATC AGCTGATGCC TGGTTATCAG TTGGCTATCT GGTCATATTT GGCTCTATTG CTGCTTTTAG TGCGTACGTA TGGCTATTAA GTGTACGCCC GGCAACACAG GTGAGCACGT ATGCCTATGT AAACCCCGTA GTAGCTGTTT TGCTGAGTAT ACTTTTTACC AGCGAAAAGG TCACTATAAT CCAGGTTGCC GGATTGGTGG TCATACTGGG CAGTGTATTG CTCATCAACC TGGCTAAATA CAGAAAAGAG CACCAGCTTA AACAAAAAAC TGCCTACTCG AAATAA
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Protein sequence | MPSQLNKKAS PLIVILAFAI VYIVWGSTYF FIQKALAGFP PFILGAFRFL AAGLLLITWC SIKGEKIFDK KSIRQAAIAG ILMLGIGNGL VIWVEQSIPS GLVAILVSSA AMWFVILDKP KWKENLQSTS TVMGLIIGFI GVILLFAEQV MHTLNNNQSN TQIVGIVLLL LAPIGWAAGS LYSKYNTTTT VSVSVNTSWQ MLAAGIAFMP GILFNSELKD FDWHMVSADA WLSVGYLVIF GSIAAFSAYV WLLSVRPATQ VSTYAYVNPV VAVLLSILFT SEKVTIIQVA GLVVILGSVL LINLAKYRKE HQLKQKTAYS K
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