Gene Phep_3997 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_3997 
Symbol 
ID8255131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp4827501 
End bp4828634 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content42% 
IMG OID644937661 
ProductFecR protein 
Protein accessionYP_003094250 
Protein GI255533878 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGAAC CAATCGATAC CTTATTTGCG AAATATCTGG ACGATCAATG CAGCTCAGCA 
GAAATTAAGT TATTGCTGGA GCATTTTAAA TTGCCCGAAA ATAAAACGCT GTTAAAAGAA
GTTATTTTAT CAGGGCTGGA AAGGCAGGCT GAGATAAAAG CTATACCCGA CGACCTGAAT
GAAAGGATAG CAGCCATTCA TCTCAGGGTA AATGAACATA TCCAAAACAC TATGGTGGTT
AAACGACCAT TGTTCGCCAG GTTGTGGCCA CGAGTGGCTG CTGTTGCTGC TATCCTTGTC
ATTATTTCTG CAACTTTGTT TTATTATAAT GGGAAACATT CGTTTGACAA CCTTGAGGAG
CAGATTGCGG CAGCTCAGAT CAAGCCAGGG AGAAACCAGG CAATATTAAC ATTGGCAAAT
GGTAGTAAAG TACAATTGAG CGATGTAAAT GGCAAACCGG TTTACATTGT GCCCGAAGGT
TCGGCAGGCG CCGCTGCAAC GTATAACACA ATAGAAGCAC CAGCTGGTGG CCAATGGCAG
GTCGTATTAC CCGATGGTAC CCGTGTATGG TTAAATGCGT TGTCCAGCAT CACTTTCCCC
ACTGCATTTA TAGGTTCGGA AAGAAAAGTA AAAATTGATG GGGAAGCTTA TTTTGAAGTG
GTTCACAATA AAGTACTGCC TTTTCGTGTA GAAAGTACCG GGCAAACAGT AGAAGTTTTA
GGTACTAAAT TTAACATCAT GGCTTACCGT GATGAAGCCC AGACCAAAAC AACACTGCTG
GAAGGTGCTG TGAAAATTGC TGCGGGCAAG CAAGAGAAAG TGCTGAAACC AGGCGAACAG
GCAATGGTAA TGAATGGAGG GGTTAAAATA GAGACCGATG TAGACCTGGA AAATGTTATA
GCCTGGAAAA ACGGAGATTT TATATTTAAG GGGGAAGATT TTAAAACCAC CATGCGCAAA
ATTGCCCGCT GGTATAATGT AGAGATCAGC TATGATCCTT CAGTACCTGA CGATATTGAA
CTTGCAGGTT GGATTTCAAG AGACAGCCAG CTTTCAATGG TATTGAAGCG AATTGAACAG
GCCGGTAAAA TAAAATTTAA CGTTGAAGGA AGGAGGATTA CCGTAATGAA GTAA
 
Protein sequence
MKEPIDTLFA KYLDDQCSSA EIKLLLEHFK LPENKTLLKE VILSGLERQA EIKAIPDDLN 
ERIAAIHLRV NEHIQNTMVV KRPLFARLWP RVAAVAAILV IISATLFYYN GKHSFDNLEE
QIAAAQIKPG RNQAILTLAN GSKVQLSDVN GKPVYIVPEG SAGAAATYNT IEAPAGGQWQ
VVLPDGTRVW LNALSSITFP TAFIGSERKV KIDGEAYFEV VHNKVLPFRV ESTGQTVEVL
GTKFNIMAYR DEAQTKTTLL EGAVKIAAGK QEKVLKPGEQ AMVMNGGVKI ETDVDLENVI
AWKNGDFIFK GEDFKTTMRK IARWYNVEIS YDPSVPDDIE LAGWISRDSQ LSMVLKRIEQ
AGKIKFNVEG RRITVMK