Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_3997 |
Symbol | |
ID | 8255131 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 4827501 |
End bp | 4828634 |
Gene Length | 1134 bp |
Protein Length | 377 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 644937661 |
Product | FecR protein |
Protein accession | YP_003094250 |
Protein GI | 255533878 |
COG category | [P] Inorganic ion transport and metabolism [T] Signal transduction mechanisms |
COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAGAAC CAATCGATAC CTTATTTGCG AAATATCTGG ACGATCAATG CAGCTCAGCA GAAATTAAGT TATTGCTGGA GCATTTTAAA TTGCCCGAAA ATAAAACGCT GTTAAAAGAA GTTATTTTAT CAGGGCTGGA AAGGCAGGCT GAGATAAAAG CTATACCCGA CGACCTGAAT GAAAGGATAG CAGCCATTCA TCTCAGGGTA AATGAACATA TCCAAAACAC TATGGTGGTT AAACGACCAT TGTTCGCCAG GTTGTGGCCA CGAGTGGCTG CTGTTGCTGC TATCCTTGTC ATTATTTCTG CAACTTTGTT TTATTATAAT GGGAAACATT CGTTTGACAA CCTTGAGGAG CAGATTGCGG CAGCTCAGAT CAAGCCAGGG AGAAACCAGG CAATATTAAC ATTGGCAAAT GGTAGTAAAG TACAATTGAG CGATGTAAAT GGCAAACCGG TTTACATTGT GCCCGAAGGT TCGGCAGGCG CCGCTGCAAC GTATAACACA ATAGAAGCAC CAGCTGGTGG CCAATGGCAG GTCGTATTAC CCGATGGTAC CCGTGTATGG TTAAATGCGT TGTCCAGCAT CACTTTCCCC ACTGCATTTA TAGGTTCGGA AAGAAAAGTA AAAATTGATG GGGAAGCTTA TTTTGAAGTG GTTCACAATA AAGTACTGCC TTTTCGTGTA GAAAGTACCG GGCAAACAGT AGAAGTTTTA GGTACTAAAT TTAACATCAT GGCTTACCGT GATGAAGCCC AGACCAAAAC AACACTGCTG GAAGGTGCTG TGAAAATTGC TGCGGGCAAG CAAGAGAAAG TGCTGAAACC AGGCGAACAG GCAATGGTAA TGAATGGAGG GGTTAAAATA GAGACCGATG TAGACCTGGA AAATGTTATA GCCTGGAAAA ACGGAGATTT TATATTTAAG GGGGAAGATT TTAAAACCAC CATGCGCAAA ATTGCCCGCT GGTATAATGT AGAGATCAGC TATGATCCTT CAGTACCTGA CGATATTGAA CTTGCAGGTT GGATTTCAAG AGACAGCCAG CTTTCAATGG TATTGAAGCG AATTGAACAG GCCGGTAAAA TAAAATTTAA CGTTGAAGGA AGGAGGATTA CCGTAATGAA GTAA
|
Protein sequence | MKEPIDTLFA KYLDDQCSSA EIKLLLEHFK LPENKTLLKE VILSGLERQA EIKAIPDDLN ERIAAIHLRV NEHIQNTMVV KRPLFARLWP RVAAVAAILV IISATLFYYN GKHSFDNLEE QIAAAQIKPG RNQAILTLAN GSKVQLSDVN GKPVYIVPEG SAGAAATYNT IEAPAGGQWQ VVLPDGTRVW LNALSSITFP TAFIGSERKV KIDGEAYFEV VHNKVLPFRV ESTGQTVEVL GTKFNIMAYR DEAQTKTTLL EGAVKIAAGK QEKVLKPGEQ AMVMNGGVKI ETDVDLENVI AWKNGDFIFK GEDFKTTMRK IARWYNVEIS YDPSVPDDIE LAGWISRDSQ LSMVLKRIEQ AGKIKFNVEG RRITVMK
|
| |