| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3991 |
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| Symbol | |
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| ID | 8255125 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4818327 |
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| End bp | 4818857 |
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| Gene Length | 531 bp |
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| Protein Length | 176 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937655 |
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| Product | RNA polymerase sigma-70 factor |
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| Protein accession | YP_003094244 |
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| Protein GI | 255533872 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02985] RNA polymerase sigma-70 factor, Bacteroides expansion family 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATTGTC AAACAGACGA ACAGCTTACC GGCCTTATAA GGGAGGGAAA TGTTTTTGCT
TTTAAAGCGC TGTATAACAG ATATGGCAAT TTGTTGTTTG TCTACATCTC AAAAAGCCTG
CACGATCAGG ACGATGCGCA GGATATTGTG CAGGAGGTGT TTGCCCAGCT CTGGAATTCG
AGGGAATCCC TGAACATTAC CACTTCCGTT TCGTCCTATT TATATGCTTC GGTGCGCAAT
AAAATGATCG ATTTAACAAG ACGCAATGGT TTACATAAAA AATACCTTGA GAAACTGGAT
ACTTTTGAAG CAGACAATAT CATGGCAGAT CACCTGGTTA GGGAGAAACA ACTTGCGGCC
TTAATTGAAA AGGAAATCGA TGCCCTTCCT ATAAAGATGC GGGAAGTATT CCTGTTGAGC
CGAAGCTCAG ATTTATCGCA TCAGGAGATT TCAGATCAGC TTGGCCTCCA AAAGCAAACC
GTCAGGTCAC ATATTAAACG TGCCCTGAAA ATTCTACGCT TAAAATTTTA A
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| Protein sequence | MDCQTDEQLT GLIREGNVFA FKALYNRYGN LLFVYISKSL HDQDDAQDIV QEVFAQLWNS
RESLNITTSV SSYLYASVRN KMIDLTRRNG LHKKYLEKLD TFEADNIMAD HLVREKQLAA
LIEKEIDALP IKMREVFLLS RSSDLSHQEI SDQLGLQKQT VRSHIKRALK ILRLKF
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