| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3989 |
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| Symbol | |
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| ID | 8255123 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4813702 |
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| End bp | 4817031 |
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| Gene Length | 3330 bp |
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| Protein Length | 1109 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644937653 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003094242 |
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| Protein GI | 255533870 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4771] Outer membrane receptor for ferrienterochelin and colicins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATATAT TTTATACCAA TAATCCGGAT ATGCGGAAAA GGCATATCTA TAAGATTCTA
TTGATTATGC GACTGACCAC CGTAATTTTA ATCGCATCGA TGCTTCAGGT AAGTGCTTCC
GGTTTTGGTC AGAAGCTGAA TTACGTTCGT AAAAGCACCA CATTACTCCA GCTGTTTAAG
GAAATAAAGG CCCAGACGGG CTATCATGTA GTATGGCCGG AACAGGACAT CAATACCCAT
ACAGTGATTA CCGCTAATTT TAGAAATGTG CCGGTAACCG AAGTGCTAAA CCAAAGCCTG
AGAGGATTAA ATTTAACGTA TGCCATCAGG GGCAGGACCA TCGTAATTAA AGCGATAAAC
CCATCCCTTA TAGATAAGGC GAAGCTCATC TTGGATTCGG TCCATGACTT TTTTCTTAGC
ATTGATGTAC AGGGGCGTGT GGTGGACGAC CGGGATGAAC CCCTGTTGGG TGCAATTGTT
AAAGTTAAAG GGAGCACTAT GGCCACTTCA ACAAATGCAG TGGGGAATTT TGAACTGAAA
CAGGTGCCCG AAAATGCTAT CCTGCTCGTT TCCTATCTTG GCTTTGAGAC CAAAGAAATC
AAAGCTGAGA AAAGTCTGGG CACCATTAAG CTGATTCTGG CTATTGACGA TTTAAAAGAG
GTGGAGATCA ATGCCGGCTA TTATACGGTT AAAAATAAAG TACGTACCGG TGCAATATCC
CGTGTGTCTG ACGAAATAAT TGCCGCACAG CCGGTTGGTA ATCCGCTGAC TGCGTTAACA
GGCAGGATGG CCGGGGTAAA TATAGCACAG AGTTCCGGCG TAGCCGGAGG AAACGTCAAT
GTAGAAATAA GGGGGAGGAA TAGCTTAAGA TCGGATGCCA GGGACCCCTT ATACCTGGTT
GATGGCGTAC CTTATCCCTC TGCCCCGCTC ACCAACAACA GTATGGGTGT TTCAATTTTA
GCAGGCAGCA GCCCCTTAAA CTACCTGAAC CCCCTCGACA TTGAAAGTAT CGAGGTGTTG
AAAGATGCAG ATGCAACTGC CATTTATGGC TCAAGGGGTG CCAATGGGGT GGTGCTGATC
AAAACAAAAT CTGCCAGGAA CGGAAAAACG GAAGTAGGCT TCAATATTTA TACCGGCATT
TCGAAAGTCA GTACGATACT CGATCTTTTA AATACTTCGC AATACCTTGA AATGCGTAAT
GAGGCATTTA AAAATGACGG GATAAGTCCA GGCTTAACAG ATTACGACCT GAATGGCAGC
TGGGACCAGC ATCGTTATAC CGACTGGCAG GATGTACTTA TCGGTGGTAC GGCACAGCTT
ACCAATATCT CGGCCTCCAT AAATGGCGGC AATGAATTTA CCCAGGTTGC CTTCAGAAGC
AATTACAACA GGCAATCGAC CGTTTTTCCG GGCAATTTTG CGGATCAGAA AGGATCGGCA
AGTTTAACCG CGGGTCACGC TTCATTGAAT AAAAAGTTTA AAGCAAATTT TTCATCATCT
TATTTGCTGG ATAACAATAA TCTACCGAGG GTTGATCTGA CCAATCATAT CCTGTTAGCC
CCCAATGCAC CTGAACCCTA TACAGACAAT GGTGATTTAA ACTGGGCCTA TAACAGCACC
GGTGCCGCAA CATGGACAAA CCCGATGGCC GCAATAAGAA ATGTTTACCA GGGCAGGTCG
GTCAGTTTCA TGTCGAGTGC TGTACTGAGT TATGAACCCG TCCGAGGTTT GATCATTAAA
AGTAATTTGG GCTATACCAA TATCAGGTTA AGGGAAAACC TGCTAAATCC GGTTAAGGCG
GGTAATCCGG CAACAGCCTC GCTGGGTTCT AATTACCTGT CAAATAATAC CATTGAAACC
TGGATTGCTG AACCCCAGCT GATCTGGAAC CCTAAGGTTT TTAAGGGGCG TCTGGAAATA
TTACTGGGCA GTACTTTTCA GAAGGACGAT CAAAAAACAG AGGCGGTTGT CGGTACGGGG
TACACCAACG ACCTGCTTTT GAAAAGCATC TCTGCTGCAC CGACCAAAAC AGGCACATCT
TCAGGCAGTC AGTATAAGTA CAATGCACTG TTTGCACGCT TAAACTACAA CCATCAGGAC
AAATATATTC TAAACCTTAC TGCCAGAAGG GATGGGTCGA GCAGGTTTGG CCCCGGAAAA
CAGTTTGCAA ACTTTGGTGC TGTAGGTGCT GCCTGGATAT TTTCGGAAGA AAAGGCATTT
AGATCCAGCC TGCCCTTTCT TTCCTTTGGA AAGTTCAGGG CAAGTTACGG TCTCACGGGA
AGTGATAAGA TCGGCGATTA TGGCTTCCTG GATACGTATT CAGCTTCCCA GCCTTATCAG
GGCGGAGCCG GGCTTACCCC AACCAGACTG GCGAATCCCG ATTACGCCTG GGAAAATAAC
AAGAAGCTTG AAGCCGCAGT TGACATGGGT TTTCTTCGCG ACAAGCTCTT TTTTACGATA
AGCTGGTACC GAAACCTGTC ATCCAACCAA CTGGTCGGTT ATTCACTCCC GGATATTACA
GGCTTCACAA GCATACAATA TAACCTGCCG GCAGTTGTGC AAAACACGGG GCTGGAGTTT
GAGCTAAACA CCAGCAATGT TTCAGGAAGA AACTTTACCT GGAAAACTGC ATTTAATTTA
ACAGTTCCCC GCAATGAACT GGTTTCGTAT CCCAATATTG CAGGCTCCGC TTATGCAAGT
GCTTATACTG TTGGGCAGTC TTTGTATACC CCTATAGGCT ATCACTATTT AGGGGTTGAC
CCGCAAAATG GTTTGTATAC TTTTGAAGAT CTGGACGGAA ACGGGAACGA CCTGGATGAA
GCAGATAAAA AAACAGCAGA TAAAGGGCTG GAAAGTCATG CTTTTGGTGG TCTGCAAAAC
AGTTTTACCT ATAAAAGCTT CCAGCTGGAT GTTTTCTTTC AATTTGTAAG CAAAACGGCA
AGGAATCCAA TAAGCCTGTA CGGCATTCCG GGTGCTATGG GTAACCAATC GGCTGAAGTT
ATGGAAAGGT GGCAAAAGCA GGGTGATGAG CGCAGTGTCC AGAAGTTTAG CCAGTCGCTC
GTCGCTGATG GTCCCGGATT AAGGTTCTAT TACACGCTGA GTTCAGATTA TTTCAGCGAT
GCATCGTTCA TCAGGCTGAA GAATGTATCG TTCTCCTGGA ATGTGCCCGC AGACTGGAGC
CGGCGATTGC GGCTAAAGGG GCTTAAATTA TACCTGCAGG GGCAAAACCT GTTTACCCTT
ACCAAATACA AAGGAGACCC TGAAGTACTA AATATCAAAA GCTTACCCAG TTTAACCACT
TTAACGGCTG GTATCCAGGT AAGCCTGTAA
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| Protein sequence | MYIFYTNNPD MRKRHIYKIL LIMRLTTVIL IASMLQVSAS GFGQKLNYVR KSTTLLQLFK
EIKAQTGYHV VWPEQDINTH TVITANFRNV PVTEVLNQSL RGLNLTYAIR GRTIVIKAIN
PSLIDKAKLI LDSVHDFFLS IDVQGRVVDD RDEPLLGAIV KVKGSTMATS TNAVGNFELK
QVPENAILLV SYLGFETKEI KAEKSLGTIK LILAIDDLKE VEINAGYYTV KNKVRTGAIS
RVSDEIIAAQ PVGNPLTALT GRMAGVNIAQ SSGVAGGNVN VEIRGRNSLR SDARDPLYLV
DGVPYPSAPL TNNSMGVSIL AGSSPLNYLN PLDIESIEVL KDADATAIYG SRGANGVVLI
KTKSARNGKT EVGFNIYTGI SKVSTILDLL NTSQYLEMRN EAFKNDGISP GLTDYDLNGS
WDQHRYTDWQ DVLIGGTAQL TNISASINGG NEFTQVAFRS NYNRQSTVFP GNFADQKGSA
SLTAGHASLN KKFKANFSSS YLLDNNNLPR VDLTNHILLA PNAPEPYTDN GDLNWAYNST
GAATWTNPMA AIRNVYQGRS VSFMSSAVLS YEPVRGLIIK SNLGYTNIRL RENLLNPVKA
GNPATASLGS NYLSNNTIET WIAEPQLIWN PKVFKGRLEI LLGSTFQKDD QKTEAVVGTG
YTNDLLLKSI SAAPTKTGTS SGSQYKYNAL FARLNYNHQD KYILNLTARR DGSSRFGPGK
QFANFGAVGA AWIFSEEKAF RSSLPFLSFG KFRASYGLTG SDKIGDYGFL DTYSASQPYQ
GGAGLTPTRL ANPDYAWENN KKLEAAVDMG FLRDKLFFTI SWYRNLSSNQ LVGYSLPDIT
GFTSIQYNLP AVVQNTGLEF ELNTSNVSGR NFTWKTAFNL TVPRNELVSY PNIAGSAYAS
AYTVGQSLYT PIGYHYLGVD PQNGLYTFED LDGNGNDLDE ADKKTADKGL ESHAFGGLQN
SFTYKSFQLD VFFQFVSKTA RNPISLYGIP GAMGNQSAEV MERWQKQGDE RSVQKFSQSL
VADGPGLRFY YTLSSDYFSD ASFIRLKNVS FSWNVPADWS RRLRLKGLKL YLQGQNLFTL
TKYKGDPEVL NIKSLPSLTT LTAGIQVSL
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