| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3988 |
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| Symbol | |
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| ID | 8255122 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4812218 |
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| End bp | 4813654 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644937652 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003094241 |
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| Protein GI | 255533869 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAATT TAAACCTACT GATCAGACCA ATGGTGATGG GTCTGATCAT GCTGATAGCC
GGATGTAAAG GATTTGTGGA GATTGATCCC CCTGTCGACC AGATTGTGAG TGAGACTGTA
TTTACAAGTG ATGATATGGC TTCTTCTACC ATAAGGGGCA TATATGCGCG GATGATGATC
GCAAATGGTT TCGCAAGCGG TTATGTTAGC AGTGTAACTT TATTGGCCGG GAAATCATCA
GATGAATTTA TAAACTACAA TACCTCCAGT ATGATGGACG TCCAGTTTGC AAGCAATAAT
TTATTGCCGG ATAATGGTAT TTTACGGACC GGATTATGGC AGGAGCCTTA TAAGTACATT
TATTATGCAA ATGCTGTATT GGAGAACCTG CAAAAGTCTG ACCTGGTTTC TGCGGACATG
AAAAGCCAGC TTGAAGGCGA AGCTTTGTTT ATCCGTGCAT TTTGCCATTT TTATCTGAGT
AACCTTTTTG GTGAGGTGCC TGTTATTTTA ACCACGGATT ACAGAGTCAA TGCCATTGCC
CGGGCAAGTT CCAAAACAGA GATCTATACC TGTATGGTTA AAGACCTGTT GAAGTCTAAA
GCATTATTGC CCGAGAGTTA CCCGGCTGCT GAAAGAACAA GGCCGAACAA ATGGGCGGCG
ACAGCCCTGC TGGCCAGGGT CTATTTATAC CAGGAAGACT GGGTAAATGC AGAAAAGCAA
GCTACCGAGG TGATCCAAAA AACAAATCTG TACAAAATAC AGTCCGACCT GAACCAGGCA
TTTCTAAAGA ATAGTGAAGA AGCGATCTTA CAGTTTGCTG CACCAGCCAG TACCGGGGTA
AATACCAGAG AGGGCCAGCT TTTTATTTTA ACTGCTGCGC CGGGTGCCAG TACCGCTGTA
ATATTGAGCA GCAATTTAAC CAGTTCCTTT GATCCGAATG ACCAGCGTGC ACAAAAATGG
ATCGGAACCT TTACCAATGC AGCTGGCAGC TGGAAATATG CATTCAAATA CAAGGTTAAA
ACAGGAGCTA CTGTGGTAAC GGAATATTCG ATGGTACTGC GCTTAGCCGA ACAATACCTC
ATCAGGGCCG AAGCCCGTAT TAACCAGGGT AATGTGGAAA CTGGAGTCCA GGACCTGAAT
GTTTTGCGCA AACGTGCCAG GCCCCTTCCC GGTGTTGCAG GCCCTAATCC ACTGCCTGAT
ATTTTGCCGA CATTAAGTCA GACCGATGCG CTGCTTGCAG TAGAAAAGGA AAGAAAATAT
GAGCTGTTTG CTGAATGGGG GCACCGCTGG TTAGACCTGA AAAGGACCCA TAAGGCTGAG
TCGGTAATGG GCGCATTAAG AGGGAGTAAC TGGCAAAGTA CAGATGTATT TTATCCCATT
CCAAAAACGG AACTGGCAAA CAACCCAAAC CTGGTGCAAA ACAAGGGATA CCAGTAA
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| Protein sequence | MKNLNLLIRP MVMGLIMLIA GCKGFVEIDP PVDQIVSETV FTSDDMASST IRGIYARMMI
ANGFASGYVS SVTLLAGKSS DEFINYNTSS MMDVQFASNN LLPDNGILRT GLWQEPYKYI
YYANAVLENL QKSDLVSADM KSQLEGEALF IRAFCHFYLS NLFGEVPVIL TTDYRVNAIA
RASSKTEIYT CMVKDLLKSK ALLPESYPAA ERTRPNKWAA TALLARVYLY QEDWVNAEKQ
ATEVIQKTNL YKIQSDLNQA FLKNSEEAIL QFAAPASTGV NTREGQLFIL TAAPGASTAV
ILSSNLTSSF DPNDQRAQKW IGTFTNAAGS WKYAFKYKVK TGATVVTEYS MVLRLAEQYL
IRAEARINQG NVETGVQDLN VLRKRARPLP GVAGPNPLPD ILPTLSQTDA LLAVEKERKY
ELFAEWGHRW LDLKRTHKAE SVMGALRGSN WQSTDVFYPI PKTELANNPN LVQNKGYQ
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