| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3980 |
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| Symbol | |
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| ID | 8255114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4799346 |
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| End bp | 4801016 |
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| Gene Length | 1671 bp |
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| Protein Length | 556 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937644 |
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| Product | RagB/SusD domain protein |
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| Protein accession | YP_003094233 |
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| Protein GI | 255533861 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.607109 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATT ATAAACAGAT GAAAAATATA TATGTATCCA TAATTGGCAG TATAATGCTC
TTTTCCTCCT GCCAGAAATT ATTAGATGAA GATGTTAGAA ATCAAATCTC CAATCTTTAT
TATACCACAC CCAGCGGCGT GGAAGACGGG GTAAAGGCCA GCTACAGCTA TCTGCGAAAC
TGGTATGGCA AGCAAGGGTC AGCCTGGTTA ACGATGTATG GGGATGAATA TACCAATGGA
GCTGCCGATG CCACAATGAA TGGTTATACT TCTGGTCTGA ACTCATCTTA TTTAGTGGTC
AGAGATGGCT GGAACCAAAC CTATACGGCC ATCAATACCT GTAATGCAGT TTTGGCTGCG
GCAGAAAAAG TGAATATGAC TGAGCAATTA AAAAACACCA GAATCGGTGA ACTCAAATTT
TTGCGGGCTC ATTATTTCTT TCTCCTCGTT CAAACCTATG GGGCGATTCC ACTGCCTTTA
ACACCAACTA CAAGTGCTTC GAGTGTGGCC ACCAGGACAC CGATTGCTGA AGTTTACAAA
GCAATTGTTG ATGACCTGAT TTTTGCTGTG GCCAATTTAC CAGAAACTAC CCCTGACTAT
GGCCGGGCAA CTTCACTTGC TGCCAAGCAT GCTTTAGCTA AAGTGTATTT AACCCGGGCC
GGTACAGCAG TTAAAGAAGC TACAGATTAT GCCAAAGCGG CAACTCTGGC AAAAGAGGTA
ATTGCATCTG GCAAATATTC TTTATTACCC GATTTTGCAG CAATATTTGC ACAAGGGCCC
GGAGGAAGGA ACAACGAGGT TATATTCGCC TGTCAATATG ATGTGAACCA GCTCACCGGT
GGTACAGCTG GAAATCTTGG AAATCAGACA CATCTCTTTT TTACCACAGA TTATACTTCC
CAGCCGGGCA TGGTACGCGA TGTAGCTAAC GGGCGGCCCT ACAATCATTT CAGGCCAACC
AATTTTATGT TGGGACTGTA CAACAAACAA TATGACTCCC GTTTTAGCAA GTCGTTTAAA
ACGGTATGGT ATTGTAACAA GCCAGGAAGT TATACCATCA GTGGTAAAAC TGTAGCTATG
GCATTGGGTG ATACTGCTGT GGTGATGACA GATTACGAAC CTACCCAGGC ACAAAGGAAT
GCCGCAAAAT ATACGATCAT CTCACCCAGT CAGCAACACA ATACCCTGTT TCCCCAATCT
TCAAAACACA TAGACGGATT AAGGGCCGAT GTTAACAATA TAAATGGTGT AAAAGATGTG
CTTATATTTA GATTAGGTGA AACTTATCTT ATTGCTGCTG AAGCATTACT GATGGACGGC
AAGGCTGGAG ATGCGGTGTT CTATGTGAAT GAACTGAGAA AAAGAGCTGC CATTGTTTCT
TCCGATCCTG CTGTAACAAC CGCTAACAGG CAGGCCATGG AGGTAAGTGC TTCGGACCTT
AACATAGATT TCATTTTGAA TGAAAGGGCC AGGGAGCTTA ACGGGGAGTA TATGAGGTGG
TTTGATCTGG TAAGAACAGG CAAATTATTG GAACGCGTGA AACTATACAA TACACTTGCT
GCACCTAATA TTAAATCCTA TCATGTGTTG AGGCCTGTTC CACAAACCCA GATAGACAGG
GTTATTGGTG GGGCAAGTGC TTTTCCTCAA AACCCAGGAT ACGACAATTA G
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| Protein sequence | MNNYKQMKNI YVSIIGSIML FSSCQKLLDE DVRNQISNLY YTTPSGVEDG VKASYSYLRN
WYGKQGSAWL TMYGDEYTNG AADATMNGYT SGLNSSYLVV RDGWNQTYTA INTCNAVLAA
AEKVNMTEQL KNTRIGELKF LRAHYFFLLV QTYGAIPLPL TPTTSASSVA TRTPIAEVYK
AIVDDLIFAV ANLPETTPDY GRATSLAAKH ALAKVYLTRA GTAVKEATDY AKAATLAKEV
IASGKYSLLP DFAAIFAQGP GGRNNEVIFA CQYDVNQLTG GTAGNLGNQT HLFFTTDYTS
QPGMVRDVAN GRPYNHFRPT NFMLGLYNKQ YDSRFSKSFK TVWYCNKPGS YTISGKTVAM
ALGDTAVVMT DYEPTQAQRN AAKYTIISPS QQHNTLFPQS SKHIDGLRAD VNNINGVKDV
LIFRLGETYL IAAEALLMDG KAGDAVFYVN ELRKRAAIVS SDPAVTTANR QAMEVSASDL
NIDFILNERA RELNGEYMRW FDLVRTGKLL ERVKLYNTLA APNIKSYHVL RPVPQTQIDR
VIGGASAFPQ NPGYDN
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