| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3976 |
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| Symbol | |
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| ID | 8255110 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4791955 |
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| End bp | 4794345 |
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| Gene Length | 2391 bp |
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| Protein Length | 796 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644937640 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003094229 |
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| Protein GI | 255533857 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACAAATT TTTCCTGTAT CGCTAAACGC ATCACTTCTT TTTTGATGTT GTTTCTTTCC
TGCAGCCCCT TTATAACAGC ACAAGTAAAA TCCGGGACCA TTGTTTACCC CAGGGGCTCT
TTTGATGCCG ACTGGATAAG CTGTCCGGAT GTAAATTTAA AAAGTTATGG TGTGTTTCAT
ATGCGAAAAG TATTTGAACT GACTTCCAGG CCTAAACAGT TTGTTGTGCA TGTCTCGGGT
GACCAGCGTT ACCGTTTATT CGCTAACGGT ACTCCAGTAT GCTTTGGCCC TGCCCGGGGC
GACTTAAGGA ACTGGAACTA TGAGACTATA GATATCGCGC CATATTTGAA AACGGGTAAA
AACGTGCTTG CGGTACAGCT GTGGAATATG GGGTCCGGAG CTCCGGCGGC CCAGTTAACT
TATCAAACAG GGTTCATTTT ACAGGGGAAC AGCAATGCCG AGCAAATGGT CAATACAAAT
AATAGCTGGC GTATTATTCA AAATAAGGGC TACTTTCCTG AGCCGTTTCC TCCCTCAAGA
TTGGCTTCAT ATATTGTTGG CAGCTGTGAC AGTGTGGTGT TTAAAAATTA CCCTTTTGGA
TGGCAAAATA TTAATTATGA TGACAAGAGT TGGCTAAGCC CTGTTTCTGA AACTAAACCA
AGATACTATA CTGAAAAGCG TTCGCTGATA CCCCGCAGCA TTCCGATGAT GGAGGAAAAA
ATTGAACCCA TTACTGGCAT TGTTCGCATT TTAGGAACAG ACACTTCGGC AATTTTAAAC
TCATTTAATA AAAATGGATC AATCACCATT CCCGCAAATA CCAAAGCAAC AATTCTTTTT
GATAGAAAAA CACTCACCAC AGCGTATCCT GAAATAACAT TTAGTAAAGG AAGTAATGGA
AAAGTGAAGA TCACTTATGC AGAATCGTTA TTCAATAGCG AGAACTTGAA AGGAAACAGA
AATGAGATAA AAAACAAAAC CATTAAAGGG TATTACGATG TATTTCTGCC CGATGGCGGA
ACAGCCCATA CATTTAGACC TCTATGGACA CGTACTTTTC GATACATACA ATTTGACATC
ACAACTGGCA GTGAACCGAT GGTGATCGAC AAAATGCAAT CGGTATTCAC TGCCTATCCA
TTTAAAGAGC ATGCATTTTT TACGTCAAAC GATAGTACTC TGCACGAAAT ATGGGATGTT
AGCTGGCGCA CCGCCCGATT ATGTGCTAAC GAAACGTATA TGGACTGCCC TTATTATGAG
CAGTTGCAAT ACGTGGGCGA CACAAGGATA CAAGCCCTGA TTTCATTATA TGTTTCGGGA
GACGACAGGC TAATGAGAAA CGCTATTGAA CAATTCCATC AGTCACAAAT TCCTGATGGA
TTGACTATGG ATGCCTATCC TGCCGGGGGT GGTAAATTTA TCCCACCCTT TTCTTTGTTC
TGGATAGCAA TGCTTCATGA TTTTTATTGG TATCGCGATG ATGAGAAATT TATTGAAAAA
TACCTCATTC CAATGGAAGC CATTCTGAAA TGGTTTGAGT ATAGGCTGGA TAACAATTCA
GGGATGCTTG GTAAAACCGG ATATTGGAAC TTTGTAGACT GGTCGTTCAG CCCAAAGGGT
ATCCCATCTG GTGGCCTGGA GGGCAATTCA TCAATTTTAT CCCTGCAGTA TGTGTATGCT
TTAGAGCAGG CTGCAGAAAT TTTTGCACAT GCAAAACAAC AGCAAAAGGC TGATTACTAC
CATAACCTGG GCCAAAAAAT TAAAAGGGCG GTCTATGCGC GCTGTTACGA TATAAACAAC
AGATTGCTGG CCGATTCACC CGAAAGGAAA GCCTTTAGTC AGCATGCCAA TATCTGGTCG
ATAATTACAG ACTGCATACC CTTTAAAGAC CAGGAGGCTA CCATGGAAAG AATCATGAAC
GATAGCACTT TAACTGCCAC GTCGCTTTAT TATAGATTTT ATTATACGAA GGCGATGAAA
AAGGCAGGAT TGGGTTCCTT ATATTTATCT TCACTCCGTC CCTGGAAGCA AATGCTCGAC
TTAGGGTTCA GTACCTTCCC TGAAACACTT GCGCCTAATG TACGCTCTGA TTGCCATGCC
TGGAGTGCCA GCCCATGTTA CGATTTCCTG GCAACAGTAT GTGGAATAGA GCCTGGAACA
CCTGGCTTTG CTACCGTCAG GATAAGCCCG AATCTGGGCA ATCTGAAAGC AGTTTCCGGA
GAGCTGCCCC ATCCCCTTGG ACCTATTAAA GTAAGTTACA AAAAAATAAA AGAAGGCTCA
TATTCAGCCC ATATTGAATT GCCAGCAAAT TTAAATGGTA TCTTTATTTC CAAGGATCAA
AAAGTAATTT TAACAGGAGG AAAGCAGGAA ATCACATTTA AATATGAATA A
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| Protein sequence | MTNFSCIAKR ITSFLMLFLS CSPFITAQVK SGTIVYPRGS FDADWISCPD VNLKSYGVFH
MRKVFELTSR PKQFVVHVSG DQRYRLFANG TPVCFGPARG DLRNWNYETI DIAPYLKTGK
NVLAVQLWNM GSGAPAAQLT YQTGFILQGN SNAEQMVNTN NSWRIIQNKG YFPEPFPPSR
LASYIVGSCD SVVFKNYPFG WQNINYDDKS WLSPVSETKP RYYTEKRSLI PRSIPMMEEK
IEPITGIVRI LGTDTSAILN SFNKNGSITI PANTKATILF DRKTLTTAYP EITFSKGSNG
KVKITYAESL FNSENLKGNR NEIKNKTIKG YYDVFLPDGG TAHTFRPLWT RTFRYIQFDI
TTGSEPMVID KMQSVFTAYP FKEHAFFTSN DSTLHEIWDV SWRTARLCAN ETYMDCPYYE
QLQYVGDTRI QALISLYVSG DDRLMRNAIE QFHQSQIPDG LTMDAYPAGG GKFIPPFSLF
WIAMLHDFYW YRDDEKFIEK YLIPMEAILK WFEYRLDNNS GMLGKTGYWN FVDWSFSPKG
IPSGGLEGNS SILSLQYVYA LEQAAEIFAH AKQQQKADYY HNLGQKIKRA VYARCYDINN
RLLADSPERK AFSQHANIWS IITDCIPFKD QEATMERIMN DSTLTATSLY YRFYYTKAMK
KAGLGSLYLS SLRPWKQMLD LGFSTFPETL APNVRSDCHA WSASPCYDFL ATVCGIEPGT
PGFATVRISP NLGNLKAVSG ELPHPLGPIK VSYKKIKEGS YSAHIELPAN LNGIFISKDQ
KVILTGGKQE ITFKYE
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