| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_3974 |
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| Symbol | |
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| ID | 8255108 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 4788895 |
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| End bp | 4791096 |
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| Gene Length | 2202 bp |
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| Protein Length | 733 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644937638 |
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| Product | alpha-L-rhamnosidase |
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| Protein accession | YP_003094227 |
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| Protein GI | 255533855 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.559372 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAGA AATCAATAAT ATCGGCTTTT CTGTTATCCA TCCTCTATAT GGTTCCCGGA
AGGGCTCAAA ACACTCCGGT CGGGTCACCA GTGGGACTGA TGTGTGACCT GGTGTCTGCA
ACAGTTGATG TTCGGCCGGT ACTTATATTT AACAAAACAC CTGCCTTTAG CTGGGAATTG
TCTGCAGAAA AGAAAGGGTT GGTCCAGATA GCTTATCAGC TATTGGTGTC TGATGATCTG
GAAGAACTAA ACCGGGATGT GGGCAAGGTT TGGGATTCCG GAAAAATAAT GAGCTCCCTA
TCTGCTGGAG TTTTGTTAAA AAATACCACA CTGAAACCAA ATACACGCTA TTATTGGAAA
GTTAAGATAT GGGATAGCCA GAAGGCGGCG AGCCCCTACT CCAGGGCCGT ATCATTTCTA
ACGGGCGATA CGCTGTCCGC TTATAAAAAT CCCTCTTATC CCTTACAAAT TACCGAACAG
CAGCCGGTTT CATTAAAGGC AATCGGCAAA ATTTACCAGG CCGATTTCGG CAAGGATGCT
TTTGCACAGC TCAAACTTCA GCTGTCTTCA ACATTTGGAG GTGATACCGT ATTTGTACGT
TTGGGCGAAA TTTTGGATAA GGATGGCAAC ATTGACCGGA AGCCCCCTGG AAAAATCCGT
TATGCACAAT ATGTTCTGGT TTTGCAAAAA GGTACACACA CCTACAAACT CAGTATTTAT
AAAGATAACA TCAATACCAG GCCTGCCGCC ATTAAAATGC CTGCTTACGT TGGCGAGGTA
ACCCCATATA GATATTGTGA AATCGAAGGT TATAAGCAGC AAATACAAAA AGAGTTATTA
ACCAGATTGT TTGTCCACTA TAAATTCGAT GACGAAGGCT CATCCTTCCA TAGTTCTGAT
TCCACTTTGA ATGCCATATG GGATTTATGT AAGTATTCGA TAAAGGCAAC GTCTTTTACA
GGGATGTATG TAGATGGCGA CAGGGAACGT ATCCCCTATG AAGCAGATGC TTACATCAAC
CAGCTCAGCC ATTATGCGGT AGACAAAGAG TTTACAATAG CACGTAATTC ACACGAATAC
CTCATTACAC ACCCTACCTG GCCAACGGAA TGGAACCTTC AATCTGTTTT AATCGCCTGG
AATGATTACC TGTATACCGG GGATATCCGC TCTGTAGCTC ATTATTACAA AGACCTCCAG
GCCAAAACCC TCCTTTCATT AACCGATTCA ACAGGACTGA TCAGTACGTT AAACGGACTA
TTGAATGACG ATGTTAAAGC TTCGATACAT CTGAAGGATG CAACCTTAAA AGACATCGTC
GATTGGCCAA GAAATACCGA AACAGATGGT TTTGTATTTA CAAAGTACAA TGCGGTGGTC
AACGCGTTTC ATTATCGGGC GCTTGTGCTC ATGGAACAGA TCGCAAAGCA GCTGGGTAAA
ACTTCCGATG CCCATATGTA CCGGAAAAGT GCAGCCAATG TTAAAGCCGC ATTCCAAAAA
ATGTTTTTTG ACCCGGCCAG GAATATTTTT GTTGACGGTA TTGGTACCGA TCATGCTTCA
TTGCATGCCA ACGCCTTTGC TTTAGCCCTG GGCTTGGTAA ACGATCAGCA TAAGAACAGC
GTTATGGCTT TCATCAGGTC AAAAGGCATG GCCTGTAGTG TTTATGGAAG CCAGTTTTTA
TTGGACGGGG TTTATGATGC CTGCGATGGC GACTATGGTT TGTCGCTGCT TACTTCAAAA
ACCGACCGGA GCTGGTTCAA TATGATTAAA GTAGGCAGTA CCATTACACT GGAAGCCTGG
GACAATAAAT ATAAGCCCAA TCAGGATTGG AACCATGCAT GGGGTGCTGC GCCTGCAAAT
ATCATTTCGC GTAAACTAAT GGGTATCGAA CCCATAACGC CCGGTTGGAC AAGGTTCTCT
ATAAAACCTC AAATAGGATC GCTGGAGCAT GCGCGTATCA CCGTTCCTAC TGTTAAGGGA
AAGATCAAGG TAGCCTATGT ACAAAGGAAA GATAGTTTCA CTATGGATGT TGAAATACCG
GGGAATACTT CGGCCCAGGT AAGCCTCCCG CTTAAAAATG AAAGCAGATA CGAAGTTTTG
TTAGATGGTA GTCCGGTTAA AACAAGCAGG GAAAATCAAA CAGTTCTGGT AGACTACTTA
GGCTCAGGCA AGCATACATT GCATATCGTT TATAAAAAAT AA
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| Protein sequence | MKKKSIISAF LLSILYMVPG RAQNTPVGSP VGLMCDLVSA TVDVRPVLIF NKTPAFSWEL
SAEKKGLVQI AYQLLVSDDL EELNRDVGKV WDSGKIMSSL SAGVLLKNTT LKPNTRYYWK
VKIWDSQKAA SPYSRAVSFL TGDTLSAYKN PSYPLQITEQ QPVSLKAIGK IYQADFGKDA
FAQLKLQLSS TFGGDTVFVR LGEILDKDGN IDRKPPGKIR YAQYVLVLQK GTHTYKLSIY
KDNINTRPAA IKMPAYVGEV TPYRYCEIEG YKQQIQKELL TRLFVHYKFD DEGSSFHSSD
STLNAIWDLC KYSIKATSFT GMYVDGDRER IPYEADAYIN QLSHYAVDKE FTIARNSHEY
LITHPTWPTE WNLQSVLIAW NDYLYTGDIR SVAHYYKDLQ AKTLLSLTDS TGLISTLNGL
LNDDVKASIH LKDATLKDIV DWPRNTETDG FVFTKYNAVV NAFHYRALVL MEQIAKQLGK
TSDAHMYRKS AANVKAAFQK MFFDPARNIF VDGIGTDHAS LHANAFALAL GLVNDQHKNS
VMAFIRSKGM ACSVYGSQFL LDGVYDACDG DYGLSLLTSK TDRSWFNMIK VGSTITLEAW
DNKYKPNQDW NHAWGAAPAN IISRKLMGIE PITPGWTRFS IKPQIGSLEH ARITVPTVKG
KIKVAYVQRK DSFTMDVEIP GNTSAQVSLP LKNESRYEVL LDGSPVKTSR ENQTVLVDYL
GSGKHTLHIV YKK
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